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The map label for this gene is rdxB [H]

Identifier: 187928201

GI number: 187928201

Start: 1183184

End: 1184647

Strand: Direct

Name: rdxB [H]

Synonym: Rpic_1108

Alternate gene names: 187928201

Gene position: 1183184-1184647 (Clockwise)

Preceding gene: 187928200

Following gene: 187928202

Centisome position: 30.01

GC content: 62.98

Gene sequence:

>1464_bases
ATGAGCGACAAAGAACCAGCCTGGCGCCCGATGACGCCCGCCACTGCGGCGGCGGGCGCCGAGGACGCACCGACCGAGCA
GATGCTCTATGAGGTCCGGCGCAAGATCTATCCGCGCGCCGTAACAGGCGCCTTTGCGCGTTGGCGCGTCTGGCTGGTGT
TGGCCACGCAAGCCATCTTTTATGGCTTGCCGTGGTTTCAGTGGAATGGTCGCCAAGCAGTGCTGTTCGACCTGGGCGCT
CGCAAGTTCTACCTCTTTGGCCTCGTGTTGTGGCCGCAGGATGTCATCTATCTGGCAGTGCTGCTGGTGCTATCGGCGCT
GGCGCTGTTCCTGTTCACGGCGGTGGCGGGCCGGCTCTTTTGCGGCTATGCCTGCCCGCAGACGGTCTACACCGAAATCT
TCATGTGGATCGAGCGCCATGTCGAAGGCGACCGCTTTGCCCGCATCCGGCTCGACGGTGAGCGTTGGAGCCTGCGCAAG
CTGCGTCTCAAGGTCACCAAGCATTCGGCCTGGGTGCTGATCGCGTTGTGGACGGGCTTCACCTTCGTGGGCTTCTTCAC
GCCGATCCGCGATCTGGGCATGGAGACCTGGACGCTGTCGCTCGGCCCTTGGCAGACTTTCTGGATGCTCTTCTACGCAT
TCGCGACATGGGGCAACGCCGGTTTCATGCGCGAGCAGGTGTGCCGCTACATGTGTCCCTACGCTCGTTTCCAGAGCGTG
ATGGTCGATCCCGATACCTACGTCGTGACTTATGACACCCTGCGCGGCGAGCCGCGCGGCAGTCGTTCGCGCAACGCCGA
TTTCGAAGCGCAAGGTCTGGGTTCCTGCGTCGACTGCAGCATCTGTGTACAGGTGTGCCCGACCGGCATCGACATCCGCC
AAGGGCTGCAATACGAATGCATTGGTTGCGGCGCCTGCATTGATGCCTGCGATCAGGTCATGGACAAGATGCGCTACCCG
CGCGGTCTGATCCGCTATACGTCCGAACGCGCAATGCGCGATCGGCTCAGCCCGAAGGACGCCCGGCGACATCTGCTGCG
TCCGCGCGTGCTGATCTATACCGGGATCATGCTTGTGCTCATCACCGGCTTCATCGTGGCATTGGCCATGCGTCAGCCGC
TCAAGGTTGACGTGATTCGTGATCGTGGTGCACTGGCGCGTGAAGTGGACGGGGGCAAGATCGAGAACGTTTACCGCCTG
CAGTTGATGAACGCGTCCGAGCTCCCCATGCGCGTGACCATCACAGCAGAGGGCATGCCGGAACTGGATGTGCAGGGCGG
TCGTGGCGAGTCGACCACACTGGAGCTGCCACCGGCGGCCAACCGACTGCTGCCAGTGCGCGTACGCCGGCCGGCCGATG
ATGCCGCCCCCGGCTCGCACAAAATCCGTTTCGTCATCCACGCAGACAGCGGTAGCGCCAGCCTCGTACTGCGCGAACCG
TCGAGCTTCATCGTGCCGCGCTGA

Upstream 100 bases:

>100_bases
ACACGATGCCGGCACACGAGAACCTGCTCTCGCCGGAGAAAATCCGCATGCTGGCGGCCTATGTCTGGGGTCTGTCGAAC
AGCAACACGAGTCACGCGCA

Downstream 100 bases:

>100_bases
TGCGGCATCCCCAACAGGAGGCAACGATGCACGCAACGCAATCTTCCGCGCAGGCCCGTCCCTGGTGGCGCGAGCCCTGG
CCGTGGCTCCTGATGGCTGG

Product: cytochrome c oxidase accessory protein CcoG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MSDKEPAWRPMTPATAAAGAEDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAIFYGLPWFQWNGRQAVLFDLGA
RKFYLFGLVLWPQDVIYLAVLLVLSALALFLFTAVAGRLFCGYACPQTVYTEIFMWIERHVEGDRFARIRLDGERWSLRK
LRLKVTKHSAWVLIALWTGFTFVGFFTPIRDLGMETWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSV
MVDPDTYVVTYDTLRGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYP
RGLIRYTSERAMRDRLSPKDARRHLLRPRVLIYTGIMLVLITGFIVALAMRQPLKVDVIRDRGALAREVDGGKIENVYRL
QLMNASELPMRVTITAEGMPELDVQGGRGESTTLELPPAANRLLPVRVRRPADDAAPGSHKIRFVIHADSGSASLVLREP
SSFIVPR

Sequences:

>Translated_487_residues
MSDKEPAWRPMTPATAAAGAEDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAIFYGLPWFQWNGRQAVLFDLGA
RKFYLFGLVLWPQDVIYLAVLLVLSALALFLFTAVAGRLFCGYACPQTVYTEIFMWIERHVEGDRFARIRLDGERWSLRK
LRLKVTKHSAWVLIALWTGFTFVGFFTPIRDLGMETWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSV
MVDPDTYVVTYDTLRGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYP
RGLIRYTSERAMRDRLSPKDARRHLLRPRVLIYTGIMLVLITGFIVALAMRQPLKVDVIRDRGALAREVDGGKIENVYRL
QLMNASELPMRVTITAEGMPELDVQGGRGESTTLELPPAANRLLPVRVRRPADDAAPGSHKIRFVIHADSGSASLVLREP
SSFIVPR
>Mature_486_residues
SDKEPAWRPMTPATAAAGAEDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAIFYGLPWFQWNGRQAVLFDLGAR
KFYLFGLVLWPQDVIYLAVLLVLSALALFLFTAVAGRLFCGYACPQTVYTEIFMWIERHVEGDRFARIRLDGERWSLRKL
RLKVTKHSAWVLIALWTGFTFVGFFTPIRDLGMETWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSVM
VDPDTYVVTYDTLRGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYPR
GLIRYTSERAMRDRLSPKDARRHLLRPRVLIYTGIMLVLITGFIVALAMRQPLKVDVIRDRGALAREVDGGKIENVYRLQ
LMNASELPMRVTITAEGMPELDVQGGRGESTTLELPPAANRLLPVRVRRPADDAAPGSHKIRFVIHADSGSASLVLREPS
SFIVPR

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55287; Mature: 55156

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKEPAWRPMTPATAAAGAEDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAIF
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YGLPWFQWNGRQAVLFDLGARKFYLFGLVLWPQDVIYLAVLLVLSALALFLFTAVAGRLF
HCCCEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGYACPQTVYTEIFMWIERHVEGDRFARIRLDGERWSLRKLRLKVTKHSAWVLIALWTGF
HCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEHHHHH
TFVGFFTPIRDLGMETWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSV
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCEE
MVDPDTYVVTYDTLRGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDIRQGLQYEC
EECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEE
IGCGACIDACDQVMDKMRYPRGLIRYTSERAMRDRLSPKDARRHLLRPRVLIYTGIMLVL
EECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH
ITGFIVALAMRQPLKVDVIRDRGALAREVDGGKIENVYRLQLMNASELPMRVTITAEGMP
HHHHHHHHHHCCCCEEEEEECCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
ELDVQGGRGESTTLELPPAANRLLPVRVRRPADDAAPGSHKIRFVIHADSGSASLVLREP
CCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECC
SSFIVPR
CCCCCCC
>Mature Secondary Structure 
SDKEPAWRPMTPATAAAGAEDAPTEQMLYEVRRKIYPRAVTGAFARWRVWLVLATQAIF
CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YGLPWFQWNGRQAVLFDLGARKFYLFGLVLWPQDVIYLAVLLVLSALALFLFTAVAGRLF
HCCCEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGYACPQTVYTEIFMWIERHVEGDRFARIRLDGERWSLRKLRLKVTKHSAWVLIALWTGF
HCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEHHHHH
TFVGFFTPIRDLGMETWTLSLGPWQTFWMLFYAFATWGNAGFMREQVCRYMCPYARFQSV
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCEE
MVDPDTYVVTYDTLRGEPRGSRSRNADFEAQGLGSCVDCSICVQVCPTGIDIRQGLQYEC
EECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEE
IGCGACIDACDQVMDKMRYPRGLIRYTSERAMRDRLSPKDARRHLLRPRVLIYTGIMLVL
EECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH
ITGFIVALAMRQPLKVDVIRDRGALAREVDGGKIENVYRLQLMNASELPMRVTITAEGMP
HHHHHHHHHHCCCCEEEEEECCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
ELDVQGGRGESTTLELPPAANRLLPVRVRRPADDAAPGSHKIRFVIHADSGSASLVLREP
CCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECC
SSFIVPR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]