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The map label for this gene is 187928100

Identifier: 187928100

GI number: 187928100

Start: 1063780

End: 1064430

Strand: Reverse

Name: 187928100

Synonym: Rpic_1007

Alternate gene names: NA

Gene position: 1064430-1063780 (Counterclockwise)

Preceding gene: 187928106

Following gene: 187928099

Centisome position: 27.0

GC content: 66.05

Gene sequence:

>651_bases
ATGAACAGACCGCTGCGTCAGACCGCTGCAACCCTGGCTTGCCTGCTTGCCATGTCGGCGGCACCGGCCTTCGCCCAGAC
CGCCGGCTTTGCCTTGCCGGCCGATTTGATGCCCAGCACGCAGCAAGCGCCGCAGGTCGCGCGCCAGAAGCGCATCGACG
ACGCGTTGACCAAGAAGCAATACGCCGAGGCGCTGACAGAGCTGGACAAGGACGTCGCCTCCCAGCCGCGCAACGCGCAG
GCACGCTTCCAGCGCGGTGTTGCACTTGCCGGCCTGGGCCGCGCGGACGACGCCATCGTGGCCTTCAGCCAGATGACACA
GGATTTCCCGGAACTGCCCGAGCCATACATCAACCTGGCTGCGTTGTATGCCGAGCGCGGTGAGCTGCTCCGTGCCCGCG
ACAGCCTGATCATGGCGAACCGCGTGGCACCGGAAAATGCGCTGGCGCAATTCAATCTTGGCGATGTCTACGTCCGCCTG
GCCGCGCAGTCGTACCAGAGCGCGATCAAGCTGAACCCCAAGAACGCCACCGCCCGGGCACGTCTGGATGCCCTGCCCGA
CCTGCCGGGCGTGCACCCTGCCACCAAACCTGTCACGACCACGCTGCCTGCAGCCAGCGGTGTGACTGCCAAGCCGGCGA
AGCGTCAATAA

Upstream 100 bases:

>100_bases
GGCATGCTCCCCGTCAAGAACCTTTCCTGGCGCGCACGGCCGCTGCTGCGCACAAAGACGGTTTGTTAGAATGCGGCGGA
GTATAACGGAACCGATTCTC

Downstream 100 bases:

>100_bases
GAAGACGCGGCCCGATCCTGCTTTCCCACCCACAAGCTCTCTCTTCCTGACCATGCTCCGTATTCGCTCCCTCTTTGCCG
GGCTCGTGTGTGCACTGGCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNRPLRQTAATLACLLAMSAAPAFAQTAGFALPADLMPSTQQAPQVARQKRIDDALTKKQYAEALTELDKDVASQPRNAQ
ARFQRGVALAGLGRADDAIVAFSQMTQDFPELPEPYINLAALYAERGELLRARDSLIMANRVAPENALAQFNLGDVYVRL
AAQSYQSAIKLNPKNATARARLDALPDLPGVHPATKPVTTTLPAASGVTAKPAKRQ

Sequences:

>Translated_216_residues
MNRPLRQTAATLACLLAMSAAPAFAQTAGFALPADLMPSTQQAPQVARQKRIDDALTKKQYAEALTELDKDVASQPRNAQ
ARFQRGVALAGLGRADDAIVAFSQMTQDFPELPEPYINLAALYAERGELLRARDSLIMANRVAPENALAQFNLGDVYVRL
AAQSYQSAIKLNPKNATARARLDALPDLPGVHPATKPVTTTLPAASGVTAKPAKRQ
>Mature_216_residues
MNRPLRQTAATLACLLAMSAAPAFAQTAGFALPADLMPSTQQAPQVARQKRIDDALTKKQYAEALTELDKDVASQPRNAQ
ARFQRGVALAGLGRADDAIVAFSQMTQDFPELPEPYINLAALYAERGELLRARDSLIMANRVAPENALAQFNLGDVYVRL
AAQSYQSAIKLNPKNATARARLDALPDLPGVHPATKPVTTTLPAASGVTAKPAKRQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23146; Mature: 23146

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPLRQTAATLACLLAMSAAPAFAQTAGFALPADLMPSTQQAPQVARQKRIDDALTKKQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
YAEALTELDKDVASQPRNAQARFQRGVALAGLGRADDAIVAFSQMTQDFPELPEPYINLA
HHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ALYAERGELLRARDSLIMANRVAPENALAQFNLGDVYVRLAAQSYQSAIKLNPKNATARA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
RLDALPDLPGVHPATKPVTTTLPAASGVTAKPAKRQ
HHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRPLRQTAATLACLLAMSAAPAFAQTAGFALPADLMPSTQQAPQVARQKRIDDALTKKQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
YAEALTELDKDVASQPRNAQARFQRGVALAGLGRADDAIVAFSQMTQDFPELPEPYINLA
HHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
ALYAERGELLRARDSLIMANRVAPENALAQFNLGDVYVRLAAQSYQSAIKLNPKNATARA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
RLDALPDLPGVHPATKPVTTTLPAASGVTAKPAKRQ
HHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA