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The map label for this gene is trpH [H]

Identifier: 187928075

GI number: 187928075

Start: 1038122

End: 1038982

Strand: Direct

Name: trpH [H]

Synonym: Rpic_0982

Alternate gene names: 187928075

Gene position: 1038122-1038982 (Clockwise)

Preceding gene: 187928071

Following gene: 187928076

Centisome position: 26.33

GC content: 68.29

Gene sequence:

>861_bases
ATGCCAAATCTCTCCGCCGCCTCCGCCCGAAATGCCGATCTGCACTGCCACTCCACGGTGTCGGACGGCATGCTCGCGCC
GCACGAAGTTGCCGCGCGCGCTGCCGCCCACGGTGTGACGCTCTGGGCGTTGACTGACCACGACGAAGTGGGTGGACAGG
CCGCCGCGCGCGAAGCCGCAACGGCCCTGGGCATGGATTACCTCTCGGGTGTGGAGATTTCCGTGACGTGGGCGGGGCGC
ACGCTGCACATCGTCGGCCTGGGCATCGATCCGGATAACGCCGATCTGGCGCAGGGCCTGGAACGCACGCGCTCCGGCCG
CTGCGCGCGCGCTGAAGACATCAGCGCCGCGCTTGCCAAGCTCGGCATCGAAGGCGCCTACGAAGGTGCTTTGCGCTACG
CCGGCAACCCGGACATGGTCTCGCGCACCCATTTCGCACGCTTCCTCGTCGAGCACGGTCACTGCCGGGACATCCACGAG
GTGTTCGACCGCTATCTGGGCGACGGCAAGCCGGGCTACGTGCCGCATCGCTGGGCGCGCCTGGCCGATGCGATCAACTG
GATCAAGGGCGCGGGCGGCGTCGCAGTGATGGCGCATCCGGGGCGCTACACGTTGTCGCTGGTCGAGCACGGTGCGCTGT
TTGATGAATTCAAGGCGCTGGGCGGCGAGGGGGTCGAAGTCGTCACCGGCAGCCATACCCCCGACCAGTACGCGCTGTAC
GCCGACGTAGCCCGCCGTTACGGCCTGCTGGCATCGCGCGGTTCAGACTTTCATGGCCCCGGCGAGGGCCGCGTCGAACT
CGGCACACTGCCGCCGCTGCCCGACAACCTGACGCCGGTGTGGAGCCGGTGGATGTCCTGA

Upstream 100 bases:

>100_bases
GGCCCGCCGCGAACACCGCCACGGGCAGTCGGGTCTTCCGGATGCCGATCCGTGGGGGGGCAGGGCCCCCGGTTGCGCGC
CGCAGCAGTAAAATGGCGAA

Downstream 100 bases:

>100_bases
GCGCGCGGCTGCCATGTCCCAGTTCTTCCAGATCCACCCGACCACGCCGCAAGGGCGCCTGATTCGCCAGGCGGCGGAGA
TCATCCGCGCCGGCGGCCTG

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPNLSAASARNADLHCHSTVSDGMLAPHEVAARAAAHGVTLWALTDHDEVGGQAAAREAATALGMDYLSGVEISVTWAGR
TLHIVGLGIDPDNADLAQGLERTRSGRCARAEDISAALAKLGIEGAYEGALRYAGNPDMVSRTHFARFLVEHGHCRDIHE
VFDRYLGDGKPGYVPHRWARLADAINWIKGAGGVAVMAHPGRYTLSLVEHGALFDEFKALGGEGVEVVTGSHTPDQYALY
ADVARRYGLLASRGSDFHGPGEGRVELGTLPPLPDNLTPVWSRWMS

Sequences:

>Translated_286_residues
MPNLSAASARNADLHCHSTVSDGMLAPHEVAARAAAHGVTLWALTDHDEVGGQAAAREAATALGMDYLSGVEISVTWAGR
TLHIVGLGIDPDNADLAQGLERTRSGRCARAEDISAALAKLGIEGAYEGALRYAGNPDMVSRTHFARFLVEHGHCRDIHE
VFDRYLGDGKPGYVPHRWARLADAINWIKGAGGVAVMAHPGRYTLSLVEHGALFDEFKALGGEGVEVVTGSHTPDQYALY
ADVARRYGLLASRGSDFHGPGEGRVELGTLPPLPDNLTPVWSRWMS
>Mature_285_residues
PNLSAASARNADLHCHSTVSDGMLAPHEVAARAAAHGVTLWALTDHDEVGGQAAAREAATALGMDYLSGVEISVTWAGRT
LHIVGLGIDPDNADLAQGLERTRSGRCARAEDISAALAKLGIEGAYEGALRYAGNPDMVSRTHFARFLVEHGHCRDIHEV
FDRYLGDGKPGYVPHRWARLADAINWIKGAGGVAVMAHPGRYTLSLVEHGALFDEFKALGGEGVEVVTGSHTPDQYALYA
DVARRYGLLASRGSDFHGPGEGRVELGTLPPLPDNLTPVWSRWMS

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=41.6058394160584, Blast_Score=188, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30549; Mature: 30417

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLSAASARNADLHCHSTVSDGMLAPHEVAARAAAHGVTLWALTDHDEVGGQAAAREAA
CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHH
TALGMDYLSGVEISVTWAGRTLHIVGLGIDPDNADLAQGLERTRSGRCARAEDISAALAK
HHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LGIEGAYEGALRYAGNPDMVSRTHFARFLVEHGHCRDIHEVFDRYLGDGKPGYVPHRWAR
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
LADAINWIKGAGGVAVMAHPGRYTLSLVEHGALFDEFKALGGEGVEVVTGSHTPDQYALY
HHHHHHHHHCCCCEEEEECCCCEEEHHHHHCHHHHHHHHCCCCCEEEEECCCCCCHHHHH
ADVARRYGLLASRGSDFHGPGEGRVELGTLPPLPDNLTPVWSRWMS
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
PNLSAASARNADLHCHSTVSDGMLAPHEVAARAAAHGVTLWALTDHDEVGGQAAAREAA
CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHH
TALGMDYLSGVEISVTWAGRTLHIVGLGIDPDNADLAQGLERTRSGRCARAEDISAALAK
HHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LGIEGAYEGALRYAGNPDMVSRTHFARFLVEHGHCRDIHEVFDRYLGDGKPGYVPHRWAR
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
LADAINWIKGAGGVAVMAHPGRYTLSLVEHGALFDEFKALGGEGVEVVTGSHTPDQYALY
HHHHHHHHHCCCCEEEEECCCCEEEHHHHHCHHHHHHHHCCCCCEEEEECCCCCCHHHHH
ADVARRYGLLASRGSDFHGPGEGRVELGTLPPLPDNLTPVWSRWMS
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]