| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928071
Identifier: 187928071
GI number: 187928071
Start: 1035027
End: 1035944
Strand: Direct
Name: 187928071
Synonym: Rpic_0978
Alternate gene names: NA
Gene position: 1035027-1035944 (Clockwise)
Preceding gene: 187928070
Following gene: 187928075
Centisome position: 26.25
GC content: 65.14
Gene sequence:
>918_bases ATGAACTCCACCACACAGCCTGCCGTGCGCCTGGCATCCCGCTCGACGTACCTGCCCGTGCGCGGCCTGCGCTACCACAT CCGCGAATGGGGCGAGCCGGGTGCGCCAATCCTCTTCCTGTTTCACGGGTGGATGGATGTGTCGGCATCGTTCCAGTTTC TGGTCGACGCGCTGCGCCAGCGCTGGCATATCGTGGCGCCGGATTGGCGCGGCTACGGCCAGACCGCCCGGCCCACGGAC GCCCCCGGCGTCGAGAGCTACTGGTTTGCCGATTACGTGGCCGACCTCGAAGCCATCATCGACCACTACCAGCCGGAAGG GCAGGTGACGCTGGTCGGGCACAGCCTGGGCGCCAACGTGGTTTGCCTGTACGCGGGTATCCGGCCCGAGCGCGTGCGGC GCGTGGTGGATCTGGAAGGCTTCGGCATGTCGGCGTCGAAGGCATCGCAGGCGCCGCGCCGCTATGCGCGATGGCTCGAC GAGCTGAAGGACAAGCCGCGCCTGAACACCTACGCGACCGTCGAGGACGTCGCCGCGCGCCTGCAGAAGACCAACCCACG CCTGCCGGCCGACAAGGCCGCATTCCTGGCGCAACACTGGTCGAGCCAGAATGCTGACGGCCGCTGGGAGATCCTCGGCG ACCCCGCGCACAAGATCATCAATCCGCAGCTTTATCGGCTGGATGAGGTGATGGAAATCTGGCGCCGTGTTACCGCCCCC GTGCTGCACGTCGAGGCAGTCGATTCGCCCACACTAAAAGCCATTGCTGGCGACGTGCCGCTGGCCGAGTTCAAGACGCG CTTTACGGCGTTTCCTGATTTCCGTGAGGTGCTGATTGCGGATGCAGGGCACATGCTGCATCACGATCAGCCTGAACAGG TGGCCGCGCTGATCGAAGAGTTCTGTTTGCAGCGCTAA
Upstream 100 bases:
>100_bases GCGCTGGAAGCCTCGTTCTAAGCGCCACGGCGCAGCTCATCCGCCGCTATAATCCCGAGAAAAAGAACGATCGTTCGATT TATATTCGGTGACGGAAACC
Downstream 100 bases:
>100_bases GCGGCAGGTCAATCAAGAAACCGCTGCGCCGCGCCGGGCGGCGGCAGAATGCAGGTGTCTGACCGCCCAAACCATCGATA GCGATTGCGTGCAACGCGGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Hydrolase Protein; Hydrolase/Acyltransferase; Beta-Ketoacyl Synthase; Epoxide Hydrolase; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acytransferase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Or Acetyltransferase; Polyketide Synthase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNSTTQPAVRLASRSTYLPVRGLRYHIREWGEPGAPILFLFHGWMDVSASFQFLVDALRQRWHIVAPDWRGYGQTARPTD APGVESYWFADYVADLEAIIDHYQPEGQVTLVGHSLGANVVCLYAGIRPERVRRVVDLEGFGMSASKASQAPRRYARWLD ELKDKPRLNTYATVEDVAARLQKTNPRLPADKAAFLAQHWSSQNADGRWEILGDPAHKIINPQLYRLDEVMEIWRRVTAP VLHVEAVDSPTLKAIAGDVPLAEFKTRFTAFPDFREVLIADAGHMLHHDQPEQVAALIEEFCLQR
Sequences:
>Translated_305_residues MNSTTQPAVRLASRSTYLPVRGLRYHIREWGEPGAPILFLFHGWMDVSASFQFLVDALRQRWHIVAPDWRGYGQTARPTD APGVESYWFADYVADLEAIIDHYQPEGQVTLVGHSLGANVVCLYAGIRPERVRRVVDLEGFGMSASKASQAPRRYARWLD ELKDKPRLNTYATVEDVAARLQKTNPRLPADKAAFLAQHWSSQNADGRWEILGDPAHKIINPQLYRLDEVMEIWRRVTAP VLHVEAVDSPTLKAIAGDVPLAEFKTRFTAFPDFREVLIADAGHMLHHDQPEQVAALIEEFCLQR >Mature_305_residues MNSTTQPAVRLASRSTYLPVRGLRYHIREWGEPGAPILFLFHGWMDVSASFQFLVDALRQRWHIVAPDWRGYGQTARPTD APGVESYWFADYVADLEAIIDHYQPEGQVTLVGHSLGANVVCLYAGIRPERVRRVVDLEGFGMSASKASQAPRRYARWLD ELKDKPRLNTYATVEDVAARLQKTNPRLPADKAAFLAQHWSSQNADGRWEILGDPAHKIINPQLYRLDEVMEIWRRVTAP VLHVEAVDSPTLKAIAGDVPLAEFKTRFTAFPDFREVLIADAGHMLHHDQPEQVAALIEEFCLQR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34590; Mature: 34590
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTTQPAVRLASRSTYLPVRGLRYHIREWGEPGAPILFLFHGWMDVSASFQFLVDALRQ CCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH RWHIVAPDWRGYGQTARPTDAPGVESYWFADYVADLEAIIDHYQPEGQVTLVGHSLGANV CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCE VCLYAGIRPERVRRVVDLEGFGMSASKASQAPRRYARWLDELKDKPRLNTYATVEDVAAR EEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LQKTNPRLPADKAAFLAQHWSSQNADGRWEILGDPAHKIINPQLYRLDEVMEIWRRVTAP HHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCC VLHVEAVDSPTLKAIAGDVPLAEFKTRFTAFPDFREVLIADAGHMLHHDQPEQVAALIEE EEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHH FCLQR HHCCC >Mature Secondary Structure MNSTTQPAVRLASRSTYLPVRGLRYHIREWGEPGAPILFLFHGWMDVSASFQFLVDALRQ CCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH RWHIVAPDWRGYGQTARPTDAPGVESYWFADYVADLEAIIDHYQPEGQVTLVGHSLGANV CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCE VCLYAGIRPERVRRVVDLEGFGMSASKASQAPRRYARWLDELKDKPRLNTYATVEDVAAR EEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LQKTNPRLPADKAAFLAQHWSSQNADGRWEILGDPAHKIINPQLYRLDEVMEIWRRVTAP HHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCC VLHVEAVDSPTLKAIAGDVPLAEFKTRFTAFPDFREVLIADAGHMLHHDQPEQVAALIEE EEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHH FCLQR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA