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The map label for this gene is yeiE [H]

Identifier: 187928046

GI number: 187928046

Start: 1009579

End: 1010514

Strand: Reverse

Name: yeiE [H]

Synonym: Rpic_0953

Alternate gene names: 187928046

Gene position: 1010514-1009579 (Counterclockwise)

Preceding gene: 187928049

Following gene: 187928040

Centisome position: 25.63

GC content: 65.92

Gene sequence:

>936_bases
ATGAATAACAAAGCGCCTCGCGTCACACTACGTCAGTGGGCTGTCTTCGCGGCCATCGCGCAGAGTGAGACGACCACCGC
TGCCGGCGAAGCTCTTGGCCTGTCGCAATCGGCCGTCAGCGCGGCTCTGGCAGAGCTGGAATCCACGCTGGGGCATCCGC
TGTTTGATCGGCACGCACGGCGCCTGCATCTGAATGCGCTGGGCCGGCAACTATTGCCGCAGGCGCAGGCACTGCTTGAT
CACGCCGATGCGCTGGAACACGCAACCGCCCAGCCGAACGTGCGCCTGAAGCTCGCGGCCAGCAGCACAATCGGCAACTA
TGTGCTGCCCGCCCTCCTCGCAGGCTTCCGGCACGACATCGCGCCGGACAGCCAGCTCGACGTGCTGATCGGCAACACGC
AGGACGTGGTCGATGCCGTGCAACACTTCGAGGTGGACATCGGCCTGATAGAAGGCACCTGCCGCGGCGAGGCACTGGAG
ATCGAAACGTGGATCGACGATGAGATGGTGATCGTGGCCGCGCCGGGGCACCCGCTCACCCAAGGGACCGAGCCGGTCTC
ACACGCGGCGCTGCGCGAGGCGGGCTGGCTCATGCGCGAACCCGGCTCCGGCACGCGCGAACTGATCGACAGCCGGATTG
CCTCGGTGGTGGGACCGCTGTATGTGGCGCTCGAACTCGGCCACTCCGAGGCCATTCAGCGCACGGTGGCGGCGGGCTAC
GGCATCAGTTGCCTGTCGCGCCACGTAGTGGCCGACGCGTTGCGAGACGGCCGGCTGGTCGAGGTGAACAGCGGCTTGCC
GCGCATCGCGCGGCCCCTGCTCATCGTGCGCCATCGGGACAAGCATCCGACGCACGGGCTCACGCAATTCATCGACGTGC
TACGCGGCTACAGAGCCGATTCGAAAAAATTCACGCAAAGGACTAGCGCGATCTGA

Upstream 100 bases:

>100_bases
ATCGTCATCACATTTGCCTTGCTTATTCACTATGCGCATAACGATATGCAGTCCGTGATAACATGTAAAACAGGTAATTT
TTGTAATTTCAACCACTTTT

Downstream 100 bases:

>100_bases
AAAAGGTTGATATAGTCTCGTTTCTTCGCGGGGCGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAG
TGTTCGAGTCACTCACGCCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNNKAPRVTLRQWAVFAAIAQSETTTAAGEALGLSQSAVSAALAELESTLGHPLFDRHARRLHLNALGRQLLPQAQALLD
HADALEHATAQPNVRLKLAASSTIGNYVLPALLAGFRHDIAPDSQLDVLIGNTQDVVDAVQHFEVDIGLIEGTCRGEALE
IETWIDDEMVIVAAPGHPLTQGTEPVSHAALREAGWLMREPGSGTRELIDSRIASVVGPLYVALELGHSEAIQRTVAAGY
GISCLSRHVVADALRDGRLVEVNSGLPRIARPLLIVRHRDKHPTHGLTQFIDVLRGYRADSKKFTQRTSAI

Sequences:

>Translated_311_residues
MNNKAPRVTLRQWAVFAAIAQSETTTAAGEALGLSQSAVSAALAELESTLGHPLFDRHARRLHLNALGRQLLPQAQALLD
HADALEHATAQPNVRLKLAASSTIGNYVLPALLAGFRHDIAPDSQLDVLIGNTQDVVDAVQHFEVDIGLIEGTCRGEALE
IETWIDDEMVIVAAPGHPLTQGTEPVSHAALREAGWLMREPGSGTRELIDSRIASVVGPLYVALELGHSEAIQRTVAAGY
GISCLSRHVVADALRDGRLVEVNSGLPRIARPLLIVRHRDKHPTHGLTQFIDVLRGYRADSKKFTQRTSAI
>Mature_311_residues
MNNKAPRVTLRQWAVFAAIAQSETTTAAGEALGLSQSAVSAALAELESTLGHPLFDRHARRLHLNALGRQLLPQAQALLD
HADALEHATAQPNVRLKLAASSTIGNYVLPALLAGFRHDIAPDSQLDVLIGNTQDVVDAVQHFEVDIGLIEGTCRGEALE
IETWIDDEMVIVAAPGHPLTQGTEPVSHAALREAGWLMREPGSGTRELIDSRIASVVGPLYVALELGHSEAIQRTVAAGY
GISCLSRHVVADALRDGRLVEVNSGLPRIARPLLIVRHRDKHPTHGLTQFIDVLRGYRADSKKFTQRTSAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=285, Percent_Identity=48.4210526315789, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI87082132, Length=259, Percent_Identity=28.1853281853282, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788748, Length=291, Percent_Identity=29.8969072164948, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=25.503355704698, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI145693105, Length=295, Percent_Identity=24.7457627118644, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788887, Length=195, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081904, Length=297, Percent_Identity=26.5993265993266, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788296, Length=235, Percent_Identity=27.2340425531915, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33557; Mature: 33557

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKAPRVTLRQWAVFAAIAQSETTTAAGEALGLSQSAVSAALAELESTLGHPLFDRHAR
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH
RLHLNALGRQLLPQAQALLDHADALEHATAQPNVRLKLAASSTIGNYVLPALLAGFRHDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC
APDSQLDVLIGNTQDVVDAVQHFEVDIGLIEGTCRGEALEIETWIDDEMVIVAAPGHPLT
CCCCCEEEEECCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCC
QGTEPVSHAALREAGWLMREPGSGTRELIDSRIASVVGPLYVALELGHSEAIQRTVAAGY
CCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
GISCLSRHVVADALRDGRLVEVNSGLPRIARPLLIVRHRDKHPTHGLTQFIDVLRGYRAD
CHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCC
SKKFTQRTSAI
HHHHHHHHCCC
>Mature Secondary Structure
MNNKAPRVTLRQWAVFAAIAQSETTTAAGEALGLSQSAVSAALAELESTLGHPLFDRHAR
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH
RLHLNALGRQLLPQAQALLDHADALEHATAQPNVRLKLAASSTIGNYVLPALLAGFRHDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC
APDSQLDVLIGNTQDVVDAVQHFEVDIGLIEGTCRGEALEIETWIDDEMVIVAAPGHPLT
CCCCCEEEEECCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCC
QGTEPVSHAALREAGWLMREPGSGTRELIDSRIASVVGPLYVALELGHSEAIQRTVAAGY
CCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
GISCLSRHVVADALRDGRLVEVNSGLPRIARPLLIVRHRDKHPTHGLTQFIDVLRGYRAD
CHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCC
SKKFTQRTSAI
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]