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The map label for this gene is fdxA [H]

Identifier: 187928049

GI number: 187928049

Start: 1012989

End: 1013318

Strand: Reverse

Name: fdxA [H]

Synonym: Rpic_0956

Alternate gene names: 187928049

Gene position: 1013318-1012989 (Counterclockwise)

Preceding gene: 187928050

Following gene: 187928046

Centisome position: 25.7

GC content: 61.52

Gene sequence:

>330_bases
ATGACTCACGTCGTTACCGAAAGCTGTGTCCGCTGCAAGTACACCGACTGCGTGGACGTCTGCCCCGTCGACTGCTTCCG
CGAAGGCCCGAACTTCCTGACGATTGATCCGGACGAGTGCATCGACTGTGCCGTCTGCGTGGCCGAGTGCCCGGTCAACG
CCATCTACGCCGAAGAAGACGTGCCCGCCGATCAGCAGAAGTGGATCGCCATCAATGTCGAGCTTGCACAAGCCGGCTGG
CCGTCCATCACCAAGACCAAGCAACCCTTGCCCGACGCCGACGACTGGAAGGACGTGAAGGACAAGGAGCAGTACCTCGA
CCGCGGCTGA

Upstream 100 bases:

>100_bases
GCACGGCCGGTGCGTTACAATGCGAGATTGCCGGCATGGAAACGCCCAAGCATCCATGACCGCGCGCCCCACGAATTCCT
AGCATCAACTTCCAAGCGAA

Downstream 100 bases:

>100_bases
ACGCGGTTGAACGAGCTTGCCCGGCACACTTTTTGTAGTGCATCGCAAAAAAAGGTATTGACGGGCAGATCGAAAACTAG
CTAGAATTCATTTCTTCGCT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINVELAQAGW
PSITKTKQPLPDADDWKDVKDKEQYLDRG

Sequences:

>Translated_109_residues
MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINVELAQAGW
PSITKTKQPLPDADDWKDVKDKEQYLDRG
>Mature_108_residues
THVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINVELAQAGWP
SITKTKQPLPDADDWKDVKDKEQYLDRG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12240; Mature: 12109

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
8.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED
CCCCCCCHHHHCCCCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCCCEEECCCC
VPADQQKWIAINVELAQAGWPSITKTKQPLPDADDWKDVKDKEQYLDRG
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
THVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED
CCCCCCHHHHCCCCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCCCEEECCCC
VPADQQKWIAINVELAQAGWPSITKTKQPLPDADDWKDVKDKEQYLDRG
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]