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The map label for this gene is yphB [H]

Identifier: 187928045

GI number: 187928045

Start: 1007641

End: 1008576

Strand: Direct

Name: yphB [H]

Synonym: Rpic_0950

Alternate gene names: 187928045

Gene position: 1007641-1008576 (Clockwise)

Preceding gene: 187928044

Following gene: 187928047

Centisome position: 25.56

GC content: 67.74

Gene sequence:

>936_bases
ATGCATAGCCAGACCTGGCTTGCGCCCGGGCCGGTGCATACGCTGCAGGCCGGCGCGCTGACGATGGATGTCGCGCCGGC
GGCAGGCGGCCGCATTGCCTCGCTGGCGTCGGCCAGCGAGGGCGGCCGGCGTGTCGACTGGTTGGCGCCGATGTCGGACG
ACTGCCTGCGTGACGGCTTCGAGGGGTTGGCATGGCCCAAGGCCGGGTGCTATCCGCTGCTTCCGTTCTCCAACCGCATC
CGCGACGGGCGCTTCGAATGGGGCGGCCGGGAAGTCCATCTCGCGCCGCATCCGCGCCAAGCGCATGCCATGCACGGATT
GGCGCATGCACGGGCCTGGATGGTGGAGAAGCTCACTGCGTCGTCGATCGAACTCGGCTTGCGCTATGTGCCCGAGGTGG
ACAACTGGCCCTGGCCGTTCACCGCCACGCAAACGCTGGTGCTGACTGAATCCGGTCTGGAAGCCGTCATGACCCTGCGC
AACGATGGCGACAGCAGCATGCCGGCCGGCGGCGGCTTCCATCCATATTTCGCCCGCACGGCCGATACACGCTTGCAGTT
TGAGGCTGCGACGATGTGGCCGACCGACGCCGGTGAAGTTGCCGTCCGCCGCGAGCCGATCACGCCGCGGGAAGATTTCC
GTCACGCCCGCGCATTGCCGGATGCGGCGCTCAGCGTCTATTACAGCGAATGGCAGCGACGTGCCGTGATGTCCCGCGCG
GGCAGGGTGCTCACGCTGAGCGCCGATGACCCGCTCGACCACTTCATCCTCCACGCGCCGCACGCGCAGCCTTATTTCTG
CCTGGAGCCCATTTCACACGTGGCCGACGCGATCAACCTGGCGGCGCAAGGATGGGAAGGCACGGGCCTGCGCGCGTTGG
CCCCGGGCGAGACGCTGCTGATGCGCATGCAACTGCGCATCGGAACAACGGCCTGA

Upstream 100 bases:

>100_bases
TCGTCAACGCCGTGGCCTCGGTGGGCGACTCGCAGAACGGCACGCCGTCGAACGGACGCAGCCAGTTTGTGGGCATGGTC
GGCATTCGGCATTCGTTCTG

Downstream 100 bases:

>100_bases
AATGCGACGCTGCGCTAGCGGCGCGCCTCGGCCCACGCTGCTTCCTTGCCGAACACTCCGTCAGAAATTCGATAAACGCG
CTGACCTTGGCCGACAGGTT

Product: Aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MHSQTWLAPGPVHTLQAGALTMDVAPAAGGRIASLASASEGGRRVDWLAPMSDDCLRDGFEGLAWPKAGCYPLLPFSNRI
RDGRFEWGGREVHLAPHPRQAHAMHGLAHARAWMVEKLTASSIELGLRYVPEVDNWPWPFTATQTLVLTESGLEAVMTLR
NDGDSSMPAGGGFHPYFARTADTRLQFEAATMWPTDAGEVAVRREPITPREDFRHARALPDAALSVYYSEWQRRAVMSRA
GRVLTLSADDPLDHFILHAPHAQPYFCLEPISHVADAINLAAQGWEGTGLRALAPGETLLMRMQLRIGTTA

Sequences:

>Translated_311_residues
MHSQTWLAPGPVHTLQAGALTMDVAPAAGGRIASLASASEGGRRVDWLAPMSDDCLRDGFEGLAWPKAGCYPLLPFSNRI
RDGRFEWGGREVHLAPHPRQAHAMHGLAHARAWMVEKLTASSIELGLRYVPEVDNWPWPFTATQTLVLTESGLEAVMTLR
NDGDSSMPAGGGFHPYFARTADTRLQFEAATMWPTDAGEVAVRREPITPREDFRHARALPDAALSVYYSEWQRRAVMSRA
GRVLTLSADDPLDHFILHAPHAQPYFCLEPISHVADAINLAAQGWEGTGLRALAPGETLLMRMQLRIGTTA
>Mature_311_residues
MHSQTWLAPGPVHTLQAGALTMDVAPAAGGRIASLASASEGGRRVDWLAPMSDDCLRDGFEGLAWPKAGCYPLLPFSNRI
RDGRFEWGGREVHLAPHPRQAHAMHGLAHARAWMVEKLTASSIELGLRYVPEVDNWPWPFTATQTLVLTESGLEAVMTLR
NDGDSSMPAGGGFHPYFARTADTRLQFEAATMWPTDAGEVAVRREPITPREDFRHARALPDAALSVYYSEWQRRAVMSRA
GRVLTLSADDPLDHFILHAPHAQPYFCLEPISHVADAINLAAQGWEGTGLRALAPGETLLMRMQLRIGTTA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=307, Percent_Identity=29.3159609120521, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 34117; Mature: 34117

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSQTWLAPGPVHTLQAGALTMDVAPAAGGRIASLASASEGGRRVDWLAPMSDDCLRDGF
CCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHCC
EGLAWPKAGCYPLLPFSNRIRDGRFEWGGREVHLAPHPRQAHAMHGLAHARAWMVEKLTA
CCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SSIELGLRYVPEVDNWPWPFTATQTLVLTESGLEAVMTLRNDGDSSMPAGGGFHPYFART
HHHHHCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCC
ADTRLQFEAATMWPTDAGEVAVRREPITPREDFRHARALPDAALSVYYSEWQRRAVMSRA
CCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GRVLTLSADDPLDHFILHAPHAQPYFCLEPISHVADAINLAAQGWEGTGLRALAPGETLL
CCEEEEECCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHEE
MRMQLRIGTTA
EEEEEECCCCC
>Mature Secondary Structure
MHSQTWLAPGPVHTLQAGALTMDVAPAAGGRIASLASASEGGRRVDWLAPMSDDCLRDGF
CCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHCC
EGLAWPKAGCYPLLPFSNRIRDGRFEWGGREVHLAPHPRQAHAMHGLAHARAWMVEKLTA
CCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SSIELGLRYVPEVDNWPWPFTATQTLVLTESGLEAVMTLRNDGDSSMPAGGGFHPYFART
HHHHHCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCC
ADTRLQFEAATMWPTDAGEVAVRREPITPREDFRHARALPDAALSVYYSEWQRRAVMSRA
CCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GRVLTLSADDPLDHFILHAPHAQPYFCLEPISHVADAINLAAQGWEGTGLRALAPGETLL
CCEEEEECCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHEE
MRMQLRIGTTA
EEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]