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The map label for this gene is 187928035

Identifier: 187928035

GI number: 187928035

Start: 994627

End: 996306

Strand: Direct

Name: 187928035

Synonym: Rpic_0940

Alternate gene names: NA

Gene position: 994627-996306 (Clockwise)

Preceding gene: 187928034

Following gene: 187928036

Centisome position: 25.23

GC content: 65.71

Gene sequence:

>1680_bases
ATGGTGAAGCAAGCTGACGCAATCTGGGGTGGTTTGATTGGGCGCGCCGCGTTTGTCGGCGCGTTCGTTCTTTTTGGCGG
CGTGTGGCAGGCGGCGATGGCTCAGCCTTCCGGCGCTGACGGTGGCGATTTCATCTATCGCGTGCAGCAGGGCGACACGC
TGATCAACCTCGCTGAACGTTACATGGACAGCGTCGAAGGCTGGCGCCTGCTGCAGCGGCGCAACCATGTGGCCGATCCG
TATCGGTTGAAGCCCGGCTCGCTCCTCCGGATTTCGTTCGATCGCATTCCAGTGGTGCCCTCGACGGCGCAGGTGGTGTT
TGCACGCGATGCAACCACCGGCGGCAAGCCGCTGCAAGCGGGCATGAAGCTCGCTGAAGAGTCGCAGATCGACACCGGCG
ACAAAGGTGGAGTCACGCTGGCTTTTGATGACGGCACACGCGTGACGGTGCCGCCGGGCAGCCACGTGGCGCTCTCGCGT
GTGCGGGCGTTTGCGCGTGCCGGGCTGATCGATGTACGCGTGCACGTGAAGAAAGGCGAAGCGGAATCCAACGTCTCGCC
CAAGAAGAGCGGCGTGGGCCGTTACGAGATTTCCACGCCTGCGCTGGTGACGGGCGTGCGAGGTACGCGTTTCCGCGTGC
GGGCCAGCGAAGCGGGTTCGACGAGTTCCGTGCTGGAAGGTGAGGTTGCCACAAGCGCCGGTCGTCAGAGGCAAGCGGTC
AAGGCTGGCTTTGGCGTGGTGGCATCGGCGGGACACCTCAAGCGGGCTGCGTTGCCGGCGGCGCCCAAACTCGACGTCAT
TCCGCAACTTGTGCAGACGCCGTGCCTGCGCGCGACGTGGCAGCCGGTCAGGGGCGCGGTCGGCTATCGCGCTGCAGTGG
CGCGGGATGCCGCGCTGACCGAACTCAGCGCCTATCAATTGAGCAAGACGCCCGCGGTAACGCTCTGCGGCGATGAGGAC
GGCGACTACACGCTCGTCGTGCAAAGCATCGACGCACTCGGACTGACTAGCGAATCGGCCACGCGGCCGTTCACCGTGCG
CCTGCACCCGGAAGCGCCTTATACGATCCAGCCCGCCAGCGGCCGGACCTACCGCAGCGGGGACGTGGCATTTGCATGGG
CTGTCGTGTCCGATGCTGGTAGCTATGACATGGAAGTGGCGGGCACCGAGAGCTTTGCCTCGCCGGCTGTTCAGCAGCAT
GGCGAGGACGTGCGTCTGACCAGGCCGTTGACGGCTGGCACATGGTGGTGGCGTGTGCGCTCGGTGGCAGCGGACGGCAA
AACCGGCCCGTGGAGCGATGTGCTTCGTTTTCGCGTGCTCGACATTCCGCCGGACGCCGTACCGACAGCCGAAGTGGAAG
CGAGCGATGACGGCAAGCTGCATGCCCACTGGTCGGCGTTGTCGCCCGAACTGGCGGCATCTGGCGCGCGCACGCGTGTG
CAACTGGCGGCCGACACAAGCTTCGCCAAACCCATCGCCGACATCGTGAGCGAAGGCAACGAGGCCACCATTCCGCGGCC
GCCGTCCGGCGTGTATTACATCCGCACCGGCGTCGACTTGGGCGATGCGGCATCGGTGGTCTACGCCAAGCCGCAGCGCA
TTGACGTCGGTGCCTTCGTCGGCGATTCCGCGCGCAGCCCGGTGCAGAGCGGCGGCGGCAATCTCCTCCTCAATGACTGA

Upstream 100 bases:

>100_bases
ATCTCCAAGCTGCGGCTCAAACTCGATCTCAATCAGAAGAATGGCGTGCGGCTGGTCTCGGTGTACTCGCACGGCTATCG
GCTCGAAACCACGCAGGAAG

Downstream 100 bases:

>100_bases
ACCCGTACCCGCCCAATCGGCCGTGCGCAGCCTTGGGCGGCGCGCGCTGGTGGAGTGGGGGGTGCTGGTGGCGCTGGCAG
CGCTGTTGACATTCGGCGCG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MVKQADAIWGGLIGRAAFVGAFVLFGGVWQAAMAQPSGADGGDFIYRVQQGDTLINLAERYMDSVEGWRLLQRRNHVADP
YRLKPGSLLRISFDRIPVVPSTAQVVFARDATTGGKPLQAGMKLAEESQIDTGDKGGVTLAFDDGTRVTVPPGSHVALSR
VRAFARAGLIDVRVHVKKGEAESNVSPKKSGVGRYEISTPALVTGVRGTRFRVRASEAGSTSSVLEGEVATSAGRQRQAV
KAGFGVVASAGHLKRAALPAAPKLDVIPQLVQTPCLRATWQPVRGAVGYRAAVARDAALTELSAYQLSKTPAVTLCGDED
GDYTLVVQSIDALGLTSESATRPFTVRLHPEAPYTIQPASGRTYRSGDVAFAWAVVSDAGSYDMEVAGTESFASPAVQQH
GEDVRLTRPLTAGTWWWRVRSVAADGKTGPWSDVLRFRVLDIPPDAVPTAEVEASDDGKLHAHWSALSPELAASGARTRV
QLAADTSFAKPIADIVSEGNEATIPRPPSGVYYIRTGVDLGDAASVVYAKPQRIDVGAFVGDSARSPVQSGGGNLLLND

Sequences:

>Translated_559_residues
MVKQADAIWGGLIGRAAFVGAFVLFGGVWQAAMAQPSGADGGDFIYRVQQGDTLINLAERYMDSVEGWRLLQRRNHVADP
YRLKPGSLLRISFDRIPVVPSTAQVVFARDATTGGKPLQAGMKLAEESQIDTGDKGGVTLAFDDGTRVTVPPGSHVALSR
VRAFARAGLIDVRVHVKKGEAESNVSPKKSGVGRYEISTPALVTGVRGTRFRVRASEAGSTSSVLEGEVATSAGRQRQAV
KAGFGVVASAGHLKRAALPAAPKLDVIPQLVQTPCLRATWQPVRGAVGYRAAVARDAALTELSAYQLSKTPAVTLCGDED
GDYTLVVQSIDALGLTSESATRPFTVRLHPEAPYTIQPASGRTYRSGDVAFAWAVVSDAGSYDMEVAGTESFASPAVQQH
GEDVRLTRPLTAGTWWWRVRSVAADGKTGPWSDVLRFRVLDIPPDAVPTAEVEASDDGKLHAHWSALSPELAASGARTRV
QLAADTSFAKPIADIVSEGNEATIPRPPSGVYYIRTGVDLGDAASVVYAKPQRIDVGAFVGDSARSPVQSGGGNLLLND
>Mature_559_residues
MVKQADAIWGGLIGRAAFVGAFVLFGGVWQAAMAQPSGADGGDFIYRVQQGDTLINLAERYMDSVEGWRLLQRRNHVADP
YRLKPGSLLRISFDRIPVVPSTAQVVFARDATTGGKPLQAGMKLAEESQIDTGDKGGVTLAFDDGTRVTVPPGSHVALSR
VRAFARAGLIDVRVHVKKGEAESNVSPKKSGVGRYEISTPALVTGVRGTRFRVRASEAGSTSSVLEGEVATSAGRQRQAV
KAGFGVVASAGHLKRAALPAAPKLDVIPQLVQTPCLRATWQPVRGAVGYRAAVARDAALTELSAYQLSKTPAVTLCGDED
GDYTLVVQSIDALGLTSESATRPFTVRLHPEAPYTIQPASGRTYRSGDVAFAWAVVSDAGSYDMEVAGTESFASPAVQQH
GEDVRLTRPLTAGTWWWRVRSVAADGKTGPWSDVLRFRVLDIPPDAVPTAEVEASDDGKLHAHWSALSPELAASGARTRV
QLAADTSFAKPIADIVSEGNEATIPRPPSGVYYIRTGVDLGDAASVVYAKPQRIDVGAFVGDSARSPVQSGGGNLLLND

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59120; Mature: 59120

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQADAIWGGLIGRAAFVGAFVLFGGVWQAAMAQPSGADGGDFIYRVQQGDTLINLAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
YMDSVEGWRLLQRRNHVADPYRLKPGSLLRISFDRIPVVPSTAQVVFARDATTGGKPLQA
HHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHH
GMKLAEESQIDTGDKGGVTLAFDDGTRVTVPPGSHVALSRVRAFARAGLIDVRVHVKKGE
HHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCC
AESNVSPKKSGVGRYEISTPALVTGVRGTRFRVRASEAGSTSSVLEGEVATSAGRQRQAV
CCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCCCCCHHHHCCHHHHCCCHHHHHH
KAGFGVVASAGHLKRAALPAAPKLDVIPQLVQTPCLRATWQPVRGAVGYRAAVARDAALT
HHCCCCEECCCCHHHHCCCCCCCHHHHHHHHCCCHHHCCCHHHHCCCCHHHHHHHHHHHH
ELSAYQLSKTPAVTLCGDEDGDYTLVVQSIDALGLTSESATRPFTVRLHPEAPYTIQPAS
HHHHHHCCCCCEEEEECCCCCCEEEEEEECHHHCCCCCCCCCCEEEEECCCCCEEEECCC
GRTYRSGDVAFAWAVVSDAGSYDMEVAGTESFASPAVQQHGEDVRLTRPLTAGTWWWRVR
CCEEECCCEEEEEEEEECCCCCEEEECCCCHHCCCHHHHCCCCEEEECCCCCCCCEEEEE
SVAADGKTGPWSDVLRFRVLDIPPDAVPTAEVEASDDGKLHAHWSALSPELAASGARTRV
EEECCCCCCCHHHHHEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCHHHCCCCCEEE
QLAADTSFAKPIADIVSEGNEATIPRPPSGVYYIRTGVDLGDAASVVYAKPQRIDVGAFV
EEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEE
GDSARSPVQSGGGNLLLND
CCCCCCCHHCCCCEEEECC
>Mature Secondary Structure
MVKQADAIWGGLIGRAAFVGAFVLFGGVWQAAMAQPSGADGGDFIYRVQQGDTLINLAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
YMDSVEGWRLLQRRNHVADPYRLKPGSLLRISFDRIPVVPSTAQVVFARDATTGGKPLQA
HHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHH
GMKLAEESQIDTGDKGGVTLAFDDGTRVTVPPGSHVALSRVRAFARAGLIDVRVHVKKGE
HHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCC
AESNVSPKKSGVGRYEISTPALVTGVRGTRFRVRASEAGSTSSVLEGEVATSAGRQRQAV
CCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCCCCCHHHHCCHHHHCCCHHHHHH
KAGFGVVASAGHLKRAALPAAPKLDVIPQLVQTPCLRATWQPVRGAVGYRAAVARDAALT
HHCCCCEECCCCHHHHCCCCCCCHHHHHHHHCCCHHHCCCHHHHCCCCHHHHHHHHHHHH
ELSAYQLSKTPAVTLCGDEDGDYTLVVQSIDALGLTSESATRPFTVRLHPEAPYTIQPAS
HHHHHHCCCCCEEEEECCCCCCEEEEEEECHHHCCCCCCCCCCEEEEECCCCCEEEECCC
GRTYRSGDVAFAWAVVSDAGSYDMEVAGTESFASPAVQQHGEDVRLTRPLTAGTWWWRVR
CCEEECCCEEEEEEEEECCCCCEEEECCCCHHCCCHHHHCCCCEEEECCCCCCCCEEEEE
SVAADGKTGPWSDVLRFRVLDIPPDAVPTAEVEASDDGKLHAHWSALSPELAASGARTRV
EEECCCCCCCHHHHHEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCHHHCCCCCEEE
QLAADTSFAKPIADIVSEGNEATIPRPPSGVYYIRTGVDLGDAASVVYAKPQRIDVGAFV
EEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEE
GDSARSPVQSGGGNLLLND
CCCCCCCHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA