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The map label for this gene is ydiK [C]

Identifier: 187927640

GI number: 187927640

Start: 577449

End: 578498

Strand: Direct

Name: ydiK [C]

Synonym: Rpic_0540

Alternate gene names: 187927640

Gene position: 577449-578498 (Clockwise)

Preceding gene: 187927636

Following gene: 187927642

Centisome position: 14.65

GC content: 63.43

Gene sequence:

>1050_bases
ATGGATAGCGGAAACGACCACCAGAAATTCTTATACCTCCTGCTGTTCGCCGTCACGCTCGGACTCTGCTGGATCCTCTC
GCCGTTCTTTGGCGCCGTGTTCTGGGGCGTCATCCTGGCGATCCTGTTCCAGCCCGTGCAGCGCGCGCTGGTTGCCCGCA
TGGGCAAGCGGCGCAATCTCGCAGCGCTCGTCACGCTCGCCCTGATCATCCTGATCGTGATCCTGCCCGTCATCTTTGTG
GCGGCGACCATCGTGCAGGAGATCGGCGTTGCCTATCAGGAGATTCAGAGCGCGCAGCCGAATTACTCCCGGTACCTTTC
GGAAGCGGTTCATGCGCTGCCGACGTGGGTGCAGCAGTTGCTTGCCAAAGCCGGTCTGACCAACATTGCCGGCATCCAGA
AGAAGCTGGCCGATGGCGCCGCGCAGATCAGCCAGTTTGCCGCCACGAAGGCGCTGAGCATCGGGCAGAACACGTTCCAG
TTCGTGGTGGGTTTTGGCGTGATGCTGTACATGGTGTTCTTCCTGCTGCGCGATGGCACCGAGATCGGCCGCCGCGTGCG
CCGCGCGCTGCCGATGGACGAAGAGCACAAGCGCCTGCTGCTGAGCAAGTTCACCACCGTCGTGCGCGCCACCGTCAAAG
GCAACATTGCCGTGGCGCTGGTGCAGGGCGCGCTGGGCGGGCTGATCTTCTGGATCCTTGGCATTGACGGCGTGGTGCTG
TGGGGCGCGCTGATGGCGTTCCTGTCGCTGCTGCCGGCGATTGGCGCGAGCCTCGTGTGGATTCCGGTCGCGGTCTACTT
CCTGATGGTGGGGGCGATCTGGAAATGCGTGATCCTCGTCGCGTTCTGCGGCGGCGTGATCGGCCTCGTCGACAACCTGC
TGCGCCCGCTGCTGGTCGGCAAGGACACCAAGATGCCCGACTGGGTCGTGTTGATCTCCACCCTGGGCGGAATGGAGCTG
TTCGGCATCACCGGCTTCGTGATCGGCCCGCTGGTCGCCGCATTGTTCATGGCCAGCTGGGACATCTTTGCGCGCGGGCA
GAACGAATGA

Upstream 100 bases:

>100_bases
CCCTATGACAACCGCGGCCGCGCGGGCATACTCGGATTCCATTGCCTTGGCCCGGATCCTGCTTGGGCCCTTCAGACGTC
ACCTCAAGCGAAAGCAATCC

Downstream 100 bases:

>100_bases
TGCTTCGGCCGAATGGGCGGCGCGTCCCGCTCATATGCGCTCGAACCGCAGACCTGCGTGGCGGGTCAGGCGCTCGATAA
AGCGTTCATCGAACATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MDSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLAALVTLALIILIVILPVIFV
AATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALPTWVQQLLAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQ
FVVGFGVMLYMVFFLLRDGTEIGRRVRRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVL
WGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKDTKMPDWVVLISTLGGMEL
FGITGFVIGPLVAALFMASWDIFARGQNE

Sequences:

>Translated_349_residues
MDSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLAALVTLALIILIVILPVIFV
AATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALPTWVQQLLAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQ
FVVGFGVMLYMVFFLLRDGTEIGRRVRRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVL
WGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKDTKMPDWVVLISTLGGMEL
FGITGFVIGPLVAALFMASWDIFARGQNE
>Mature_349_residues
MDSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLAALVTLALIILIVILPVIFV
AATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALPTWVQQLLAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQ
FVVGFGVMLYMVFFLLRDGTEIGRRVRRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVL
WGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKDTKMPDWVVLISTLGGMEL
FGITGFVIGPLVAALFMASWDIFARGQNE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=351, Percent_Identity=28.2051282051282, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37932; Mature: 37932

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AALVTLALIILIVILPVIFVAATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALPTWVQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCH
EIGRRVRRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFARGQNE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDSGNDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AALVTLALIILIVILPVIFVAATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALPTWVQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LAKAGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCH
EIGRRVRRALPMDEEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WGALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFARGQNE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]