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The map label for this gene is recA [H]

Identifier: 187927571

GI number: 187927571

Start: 504956

End: 506014

Strand: Direct

Name: recA [H]

Synonym: Rpic_0471

Alternate gene names: 187927571

Gene position: 504956-506014 (Clockwise)

Preceding gene: 187927567

Following gene: 187927572

Centisome position: 12.81

GC content: 61.76

Gene sequence:

>1059_bases
ATGGAAGACGGTAAGAAGGCAGCCACGATGAGCGCAGAAAAGCAGAAGGCGCTGGCTGCCGCGCTCGCGCAGATCGAAAA
GCAGTTCGGCAAGGGCTCCATCATGAAGATGGGCGACGCCGAGGTCGAGCCGGTCCAGGTCGTGTCGACGGGTTCGCTGG
GGCTGGATGTGGCGCTGGGCGTTGGTGGCCTGCCGCGCGGCCGTGTGATTGAAATCTACGGTCCGGAATCGTCGGGCAAG
ACCACGCTGACACTGCAAGTGGTTGCCGAGATGCAGAAGCTGGGCGGCACTTGCGCCTTCATCGACGCAGAACATGCGCT
TGACGTCACTTATGCCGATAAGATTGGCGTAAGTGTCCCGGACCTGCTGATCTCCCAGCCGGACACGGGTGAACAGGCTT
TGGAAATTGCCGACGCGCTGGTGCGCTCGGGCTCGGTTGATCTGATCGTCATCGACTCGGTGGCCGCTCTGGTACCGAAG
GCTGAAATTGAAGGCGAAATGGGCGATGCGTTGCCCGGCCTGCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGAC
CGGCACCATCAAGAAGACCAATTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTTGGTTCGC
CGGAAACCACCACGGGCGGTAACGCGCTCAAGTTCTACGCTTCGGTGCGTCTGGACATCCGCCGTATCGGCTCAATCAAG
CGGGGCGACGACGTGGTCGGCAACGAAACCAAGGTCAAGGTCGTCAAGAACAAGGTGGCGCCGCCGTTCCGCGAAGCCAT
CTTCGACATCCTCTACGGTCAGGGCGTATCGCGCGAGGGCGAGATCATCGACCTGGGCGTGGAAGCCAAGGTGGTCGAGA
AGTCTGGCGCCTGGTACAGCTACGGCGGCGAACGCATCGGCCAGGGCCGCGACAACTGCCGCGAATACCTGCGCGAGAAC
CCCGACCTTGCCCGTGAGATCGAGAACAAGGTCCGCGAGCAACTGGGCGTGACGCCGATGGGCGCCGTCGCAGTGGCCGA
GGAAGTCGGAGAAGAGTAA

Upstream 100 bases:

>100_bases
CGCGTCGGGGCAATCACCCAGCCGCCCGTTGTTGCAGGCAACCGCTGGAATCGCAAGCCCTTGCGGCCCATTTATACACC
AATTTGCACGAAGGACGACC

Downstream 100 bases:

>100_bases
TTGGGTTGGCCGTCGGCGCAGATCGATGGCTCTATCGAGCTTCATACGCCTGCCGTTCCCCAACGGTGGGCGTTTTTCTT
TGGAACCCGCTTCTTGAACG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MEDGKKAATMSAEKQKALAAALAQIEKQFGKGSIMKMGDAEVEPVQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSGK
TTLTLQVVAEMQKLGGTCAFIDAEHALDVTYADKIGVSVPDLLISQPDTGEQALEIADALVRSGSVDLIVIDSVAALVPK
AEIEGEMGDALPGLQARLMSQALRKLTGTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK
RGDDVVGNETKVKVVKNKVAPPFREAIFDILYGQGVSREGEIIDLGVEAKVVEKSGAWYSYGGERIGQGRDNCREYLREN
PDLAREIENKVREQLGVTPMGAVAVAEEVGEE

Sequences:

>Translated_352_residues
MEDGKKAATMSAEKQKALAAALAQIEKQFGKGSIMKMGDAEVEPVQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSGK
TTLTLQVVAEMQKLGGTCAFIDAEHALDVTYADKIGVSVPDLLISQPDTGEQALEIADALVRSGSVDLIVIDSVAALVPK
AEIEGEMGDALPGLQARLMSQALRKLTGTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK
RGDDVVGNETKVKVVKNKVAPPFREAIFDILYGQGVSREGEIIDLGVEAKVVEKSGAWYSYGGERIGQGRDNCREYLREN
PDLAREIENKVREQLGVTPMGAVAVAEEVGEE
>Mature_352_residues
MEDGKKAATMSAEKQKALAAALAQIEKQFGKGSIMKMGDAEVEPVQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSGK
TTLTLQVVAEMQKLGGTCAFIDAEHALDVTYADKIGVSVPDLLISQPDTGEQALEIADALVRSGSVDLIVIDSVAALVPK
AEIEGEMGDALPGLQARLMSQALRKLTGTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK
RGDDVVGNETKVKVVKNKVAPPFREAIFDILYGQGVSREGEIIDLGVEAKVVEKSGAWYSYGGERIGQGRDNCREYLREN
PDLAREIENKVREQLGVTPMGAVAVAEEVGEE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=326, Percent_Identity=69.9386503067485, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37567; Mature: 37567

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDGKKAATMSAEKQKALAAALAQIEKQFGKGSIMKMGDAEVEPVQVVSTGSLGLDVALG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCEEEEEC
VGGLPRGRVIEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVTYADKIGVSVP
CCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECCHHEEEEEHHHCCCCCC
DLLISQPDTGEQALEIADALVRSGSVDLIVIDSVAALVPKAEIEGEMGDALPGLQARLMS
HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHH
QALRKLTGTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK
HHHHHHHCCHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCC
RGDDVVGNETKVKVVKNKVAPPFREAIFDILYGQGVSREGEIIDLGVEAKVVEKSGAWYS
CCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEE
YGGERIGQGRDNCREYLRENPDLAREIENKVREQLGVTPMGAVAVAEEVGEE
CCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEDGKKAATMSAEKQKALAAALAQIEKQFGKGSIMKMGDAEVEPVQVVSTGSLGLDVALG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCEEEEEC
VGGLPRGRVIEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVTYADKIGVSVP
CCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECCHHEEEEEHHHCCCCCC
DLLISQPDTGEQALEIADALVRSGSVDLIVIDSVAALVPKAEIEGEMGDALPGLQARLMS
HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHH
QALRKLTGTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK
HHHHHHHCCHHHCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCC
RGDDVVGNETKVKVVKNKVAPPFREAIFDILYGQGVSREGEIIDLGVEAKVVEKSGAWYS
CCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEE
YGGERIGQGRDNCREYLRENPDLAREIENKVREQLGVTPMGAVAVAEEVGEE
CCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]