| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is recX
Identifier: 187927572
GI number: 187927572
Start: 506125
End: 506604
Strand: Direct
Name: recX
Synonym: Rpic_0472
Alternate gene names: 187927572
Gene position: 506125-506604 (Clockwise)
Preceding gene: 187927571
Following gene: 187927573
Centisome position: 12.84
GC content: 63.96
Gene sequence:
>480_bases ATGCCGTTGCCACGTCAACCGTTATCGCTGAAGGCACGTGCGCTGGGCTATCTGTCTCGGCGCGAGCACAGCCGCGTCGA ATTGCGCCGTAAGTTGGTCCCGCACGCCGAGTCCGCCGAGGAGGTCGACGCGCTGCTGGATTGGCTGGAGGGCGAAAACT GGCTCTCCAACACGCGTTTTGCCGAAAGCATGGTGCACCGCCGCGCGGGCCGCTACGGTACAGCGCGCTTGATGCAGGAG TTGAAAACGCATCAGCTCGGCGAAGAGACGCTGGGCGAGGTCAAGGCGCAACTGCAAAGCACGGAAGCAGTCCGGGCGAA AGCCCTGTGGGAAAAACGCTTCGGCCGCCCACCGGCCGACCTGGCCGAACGGGCCAAGCAGGTGCGATACATGATGGCGC GCGGATTCTCCCGTTCCGTAGTGTCGCGCATCATCGCAGGGGCGGATGAGCTGCTGGAAGATGGCGACATGTCGGACTGA
Upstream 100 bases:
>100_bases CGTCGGCGCAGATCGATGGCTCTATCGAGCTTCATACGCCTGCCGTTCCCCAACGGTGGGCGTTTTTCTTTGGAACCCGC TTCTTGAACGTCAAATCCGC
Downstream 100 bases:
>100_bases ACATCGACGATCTCGCAACAATTCAGGCGGACAATCCTCTTGTGTGCAGATTACGTGGGTTGCGCCTCATGCGATCGTTG CAACCACTTTCACACTGCAT
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPLPRQPLSLKARALGYLSRREHSRVELRRKLVPHAESAEEVDALLDWLEGENWLSNTRFAESMVHRRAGRYGTARLMQE LKTHQLGEETLGEVKAQLQSTEAVRAKALWEKRFGRPPADLAERAKQVRYMMARGFSRSVVSRIIAGADELLEDGDMSD
Sequences:
>Translated_159_residues MPLPRQPLSLKARALGYLSRREHSRVELRRKLVPHAESAEEVDALLDWLEGENWLSNTRFAESMVHRRAGRYGTARLMQE LKTHQLGEETLGEVKAQLQSTEAVRAKALWEKRFGRPPADLAERAKQVRYMMARGFSRSVVSRIIAGADELLEDGDMSD >Mature_158_residues PLPRQPLSLKARALGYLSRREHSRVELRRKLVPHAESAEEVDALLDWLEGENWLSNTRFAESMVHRRAGRYGTARLMQEL KTHQLGEETLGEVKAQLQSTEAVRAKALWEKRFGRPPADLAERAKQVRYMMARGFSRSVVSRIIAGADELLEDGDMSD
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_RALPJ (B2UGE0)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001898059.1 - ProteinModelPortal: B2UGE0 - GeneID: 6288769 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_0472 - HOGENOM: HBG638240 - OMA: FELRCKM - ProtClustDB: PRK00117 - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 18140; Mature: 18009
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPRQPLSLKARALGYLSRREHSRVELRRKLVPHAESAEEVDALLDWLEGENWLSNTRF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH AESMVHRRAGRYGTARLMQELKTHQLGEETLGEVKAQLQSTEAVRAKALWEKRFGRPPAD HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LAERAKQVRYMMARGFSRSVVSRIIAGADELLEDGDMSD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PLPRQPLSLKARALGYLSRREHSRVELRRKLVPHAESAEEVDALLDWLEGENWLSNTRF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH AESMVHRRAGRYGTARLMQELKTHQLGEETLGEVKAQLQSTEAVRAKALWEKRFGRPPAD HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LAERAKQVRYMMARGFSRSVVSRIIAGADELLEDGDMSD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA