| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927566
Identifier: 187927566
GI number: 187927566
Start: 499579
End: 501405
Strand: Direct
Name: 187927566
Synonym: Rpic_0466
Alternate gene names: NA
Gene position: 499579-501405 (Clockwise)
Preceding gene: 187927565
Following gene: 187927567
Centisome position: 12.67
GC content: 64.26
Gene sequence:
>1827_bases ATGCCCAGCGCTTTCAACTTCGCCGTCTGGCCATTCGATTGCCTCAACCAGGACGAACAGCGCCTGGTGCGCGATGCCGT CGACATCGGCTATTACCCGCAAGGGCAGAGCATCCTCGATACGGGTGCCGCTCCGCAGCACCTGTTCTTGATCATCAAGG GCCACGTCGCCCAGTACGACGGCGAGGAGCTGATCGCCAGCTATGGCCCCGATGACTGTTTTGACGGCCGGGCGCTGGTG GCCGGCAAAGCCAGCAGCCGCTTCGTCGCTGCTGAAGAAGTGGTGGCTTATCAGGTGGCACGTCAGGCGGTGCGCGACCT TATTGCCGCCAACGCCACCTTCGGTGCGCTGCTTTTTTCCGATCTCGGCAGCAAGCTCAGCGCCATTGCTCAGCGGCAGA GCATGGAGACGATGCAGTCGCTGGCTGTCTCGCACGTGAGCGATGCCTTCATCCGGCCCGCCCATTTTGTGGATGCCGAC ACGGACGTGGTCTCCGTGGTGAAGCTGTTCCAGGCACAGAGCACCTCGAACGTGCTCGTGCGAGATGGCACCGCCAGCCC GCCGCGTGTGGGCATCTTCACGCGCAGTTCCTTGCAGCGCGCCGTCCTGCAAGGCACGCCGCTGGATCGTCTGCCGGTGG GGCGGATGAGCCAGTTCTCGCTCATCACCGTACCAGCCTCTGCGCAGATCGGCGACGCATTGACGCTGATGCTGCGCCAT CGCGTTCACCGGCTGGTCGTCACGCGCGGGGATGAGATTCTCGGTTTGCTGGAATCACTGGATGTGTTCAGCTTTCTGGC CAACCACTCGTATCTGCTGACAGTGCAGATCAACCTGGCGCAGGACTTGGACGCGCTCGCCCAGGTGGCAGCGCAGATTA CGCGGATGGTCGCGTTGCTCACGCGTGGCGGCTCGCGCATTGACCACGTCGCCAGTCTCGTGCGCGAAATCAACGCGTGC CTGTTTGAACGCGCCTGGCAGATGATTGCGCCCCCCGAACTCGTTGAAAACAGTTGCCTGTTCGTCATGGGCAGCGAAGG GCGCGGCGAGCAGCTGCTCAAGACCGATCAGGACAACGCGCTGGTACTGCGCGATGGTTACGTGCCACCCCCCGACCTGC AGCGCATCGTCACGCGCTTCTCCGATGCGCTCGCCGCATTCGGCTACCCGCCTTGCCCCGGCGGCATCATGCTCAGCCGG CCCGAGTGGTGCATGACCGCGAGCGACTTCGCGCGGCGCATTCGCGAATGGCTGATCCTGCCGAGCCCCGAGGGCTTGAT GCATCTGGCCATCTTCTTCGATGCCCATGCGGTGTGCGGCGATGCCGCCTTGCTCAAGCAACTGCGGCGGACGTTGCTGG AGCTAACGATCGACAATGACGCCGTACTCGGCCGCTTCGCCGCAGCCGTTGAAGCCTTCAGTGCCGCGCCGGGCTGGCGC GATCGCCTGCTCGGGTTTGGCGATCCCGACCCGGTGCTCGACGTGAAGAAGGAGGGCATCTTCCCGATTGTCCACGGCGT GCGCAGCCTCGCGCTCGCCCACCACATACTCGACGAGACCGGCACCGTGCCGCGCCTTAATGCACTGGTGCGCGCCGAGG CTCTGGACGCCCACATGGCTGCCGAGTTGAGCGAGAGCCTGCACTTCCTGATGACGCTGCGGCTCAAGGCCGGGTTGGCG GAGATCGATGCGCATCAACCGGTGTCGTGTGACGTGCATCTGTCGCGCTTGTCGTCGCTGGAGCGAGATCTGCTCAAGGA TGCACTGAGCGCGGTCAAGCGGTTCAAGGCGTTGCTGCGGCAGCGCTGGCGGACCGAGTGGATGTGA
Upstream 100 bases:
>100_bases ACGGGCCTCGGTGCGGCTGGCGCATCGGGCCACTGATCGGCCACTGGCCACGCTGACTGGAGGCGGGTGACGCATTGCAT CGCCCGCCTTCAAGGCAACC
Downstream 100 bases:
>100_bases TCATGGGCGGGTGGTCATGAGCGGGAGGCTCTCCGACTGGCTGCGGGCACTGCAAAGGCGGCGCCTGCTGCGCAGGTTGC GCGATCCGGCGTTCCGCTTC
Product: putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Signal Transduction Protein; CBS Signal-Transduction Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Nucleotidyltransferases
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MPSAFNFAVWPFDCLNQDEQRLVRDAVDIGYYPQGQSILDTGAAPQHLFLIIKGHVAQYDGEELIASYGPDDCFDGRALV AGKASSRFVAAEEVVAYQVARQAVRDLIAANATFGALLFSDLGSKLSAIAQRQSMETMQSLAVSHVSDAFIRPAHFVDAD TDVVSVVKLFQAQSTSNVLVRDGTASPPRVGIFTRSSLQRAVLQGTPLDRLPVGRMSQFSLITVPASAQIGDALTLMLRH RVHRLVVTRGDEILGLLESLDVFSFLANHSYLLTVQINLAQDLDALAQVAAQITRMVALLTRGGSRIDHVASLVREINAC LFERAWQMIAPPELVENSCLFVMGSEGRGEQLLKTDQDNALVLRDGYVPPPDLQRIVTRFSDALAAFGYPPCPGGIMLSR PEWCMTASDFARRIREWLILPSPEGLMHLAIFFDAHAVCGDAALLKQLRRTLLELTIDNDAVLGRFAAAVEAFSAAPGWR DRLLGFGDPDPVLDVKKEGIFPIVHGVRSLALAHHILDETGTVPRLNALVRAEALDAHMAAELSESLHFLMTLRLKAGLA EIDAHQPVSCDVHLSRLSSLERDLLKDALSAVKRFKALLRQRWRTEWM
Sequences:
>Translated_608_residues MPSAFNFAVWPFDCLNQDEQRLVRDAVDIGYYPQGQSILDTGAAPQHLFLIIKGHVAQYDGEELIASYGPDDCFDGRALV AGKASSRFVAAEEVVAYQVARQAVRDLIAANATFGALLFSDLGSKLSAIAQRQSMETMQSLAVSHVSDAFIRPAHFVDAD TDVVSVVKLFQAQSTSNVLVRDGTASPPRVGIFTRSSLQRAVLQGTPLDRLPVGRMSQFSLITVPASAQIGDALTLMLRH RVHRLVVTRGDEILGLLESLDVFSFLANHSYLLTVQINLAQDLDALAQVAAQITRMVALLTRGGSRIDHVASLVREINAC LFERAWQMIAPPELVENSCLFVMGSEGRGEQLLKTDQDNALVLRDGYVPPPDLQRIVTRFSDALAAFGYPPCPGGIMLSR PEWCMTASDFARRIREWLILPSPEGLMHLAIFFDAHAVCGDAALLKQLRRTLLELTIDNDAVLGRFAAAVEAFSAAPGWR DRLLGFGDPDPVLDVKKEGIFPIVHGVRSLALAHHILDETGTVPRLNALVRAEALDAHMAAELSESLHFLMTLRLKAGLA EIDAHQPVSCDVHLSRLSSLERDLLKDALSAVKRFKALLRQRWRTEWM >Mature_607_residues PSAFNFAVWPFDCLNQDEQRLVRDAVDIGYYPQGQSILDTGAAPQHLFLIIKGHVAQYDGEELIASYGPDDCFDGRALVA GKASSRFVAAEEVVAYQVARQAVRDLIAANATFGALLFSDLGSKLSAIAQRQSMETMQSLAVSHVSDAFIRPAHFVDADT DVVSVVKLFQAQSTSNVLVRDGTASPPRVGIFTRSSLQRAVLQGTPLDRLPVGRMSQFSLITVPASAQIGDALTLMLRHR VHRLVVTRGDEILGLLESLDVFSFLANHSYLLTVQINLAQDLDALAQVAAQITRMVALLTRGGSRIDHVASLVREINACL FERAWQMIAPPELVENSCLFVMGSEGRGEQLLKTDQDNALVLRDGYVPPPDLQRIVTRFSDALAAFGYPPCPGGIMLSRP EWCMTASDFARRIREWLILPSPEGLMHLAIFFDAHAVCGDAALLKQLRRTLLELTIDNDAVLGRFAAAVEAFSAAPGWRD RLLGFGDPDPVLDVKKEGIFPIVHGVRSLALAHHILDETGTVPRLNALVRAEALDAHMAAELSESLHFLMTLRLKAGLAE IDAHQPVSCDVHLSRLSSLERDLLKDALSAVKRFKALLRQRWRTEWM
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66750; Mature: 66618
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAFNFAVWPFDCLNQDEQRLVRDAVDIGYYPQGQSILDTGAAPQHLFLIIKGHVAQYD CCCCCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCC GEELIASYGPDDCFDGRALVAGKASSRFVAAEEVVAYQVARQAVRDLIAANATFGALLFS CHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DLGSKLSAIAQRQSMETMQSLAVSHVSDAFIRPAHFVDADTDVVSVVKLFQAQSTSNVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE RDGTASPPRVGIFTRSSLQRAVLQGTPLDRLPVGRMSQFSLITVPASAQIGDALTLMLRH ECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH RVHRLVVTRGDEILGLLESLDVFSFLANHSYLLTVQINLAQDLDALAQVAAQITRMVALL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHH TRGGSRIDHVASLVREINACLFERAWQMIAPPELVENSCLFVMGSEGRGEQLLKTDQDNA HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCHHHHCCCCCE LVLRDGYVPPPDLQRIVTRFSDALAAFGYPPCPGGIMLSRPEWCMTASDFARRIREWLIL EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHCCHHHHHHHHHHHEEC PSPEGLMHLAIFFDAHAVCGDAALLKQLRRTLLELTIDNDAVLGRFAAAVEAFSAAPGWR CCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCHH DRLLGFGDPDPVLDVKKEGIFPIVHGVRSLALAHHILDETGTVPRLNALVRAEALDAHMA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AELSESLHFLMTLRLKAGLAEIDAHQPVSCDVHLSRLSSLERDLLKDALSAVKRFKALLR HHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRWRTEWM HHHHCCCC >Mature Secondary Structure PSAFNFAVWPFDCLNQDEQRLVRDAVDIGYYPQGQSILDTGAAPQHLFLIIKGHVAQYD CCCCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCHHHCC GEELIASYGPDDCFDGRALVAGKASSRFVAAEEVVAYQVARQAVRDLIAANATFGALLFS CHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DLGSKLSAIAQRQSMETMQSLAVSHVSDAFIRPAHFVDADTDVVSVVKLFQAQSTSNVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE RDGTASPPRVGIFTRSSLQRAVLQGTPLDRLPVGRMSQFSLITVPASAQIGDALTLMLRH ECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH RVHRLVVTRGDEILGLLESLDVFSFLANHSYLLTVQINLAQDLDALAQVAAQITRMVALL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHH TRGGSRIDHVASLVREINACLFERAWQMIAPPELVENSCLFVMGSEGRGEQLLKTDQDNA HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCHHHHCCCCCE LVLRDGYVPPPDLQRIVTRFSDALAAFGYPPCPGGIMLSRPEWCMTASDFARRIREWLIL EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHCCHHHHHHHHHHHEEC PSPEGLMHLAIFFDAHAVCGDAALLKQLRRTLLELTIDNDAVLGRFAAAVEAFSAAPGWR CCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCHH DRLLGFGDPDPVLDVKKEGIFPIVHGVRSLALAHHILDETGTVPRLNALVRAEALDAHMA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AELSESLHFLMTLRLKAGLAEIDAHQPVSCDVHLSRLSSLERDLLKDALSAVKRFKALLR HHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRWRTEWM HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA