| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is actP [H]
Identifier: 187927565
GI number: 187927565
Start: 497784
End: 499514
Strand: Direct
Name: actP [H]
Synonym: Rpic_0465
Alternate gene names: 187927565
Gene position: 497784-499514 (Clockwise)
Preceding gene: 187927564
Following gene: 187927566
Centisome position: 12.63
GC content: 63.26
Gene sequence:
>1731_bases ATGAAGAAGATGCTTTCGATCCTGCTGGTGGCGCTACTGGCCGCTGGCGCCTGCGGGGCGGCTCTGGCTGCCGGCGGCGA TGTCGGACAGACCGCCAAGCAGGAAACCAACACCACGGCCATCGTTCTGTTTGCTCTGTTCGTGGCCGGCACGCTGTGGA TCACGAAGTGGGCGGCCAAGCGTACGCGGTCCGCGGCCGATTTCTACACGGCGGGCGGCGGCATCACCGGCTTCCAGAAT GGCCTGGCCATTTCGGGCGACTACATGTCGGCAGCGTCCTTCCTCGGTATTTCCGCGGCCGTGATGACCTCCGGCTACGA CGGCCTGATCTACTCCATCGGCTTTCTGGTCGGCTGGCCGATCATCACGTTCCTGATGGCCGAGCGGCTGCGCAACCTTG GCAAGTTCACCTTTGCAGACGTGGCAGGCTACCGGTTCGAGCAAGGCCCGATCCGCAGCTTTGCCGCGGTTGGCACGCTG GTGGTGGTGGCGTTCTATCTGATCGCTCAGATGGTGGGTGCAGGCCAGCTCATCAAACTGCTGTTCGGGCTGGATTACTG GATCGCGGTGGTCATTGTCGGCGCGTTGATGATGGTCTACGTGCTGTTCGGCGGCATGACCGCAACCACCTGGGTGCAGA TCATCAAGGCGTGCATGCTGCTGGCCGGCGTGACGTTCATGGCCATCATGGTGCTGGCGCAGTACGGTTTCAGTCTGGAG GCGTTGTTCGCCAAGGCTGTGCAGGTCAAGACCGCCATTGCAGCCAATGCCGGCAAATCGCCCGATGAGGCCGCCAAGAT CGGTCTGTCGGTGATGGCGCCGGGTGGCTTCATCAAGGACCCGATCTCGGCCATCTCGTTCGGCATGGCGCTGATGTTCG GCACCGCCGGTCTGCCGCACATCCTGATGCGTTTCTTCACGGTCCCGGATGCCAAGGAGGCGCGCAAATCGGTCTTCTGG GCGACCACCTGGATCGGCTACTTCTACATCCTGATCTTCATCATCGGCTTTGGTGCGATCACGCTGGTGTTGACGAACCC CGAACTGTCCGACGTGGCCAAGGGTGTCATCAAGGGCGGCGCGGGCACGGCCAACATGGCTGCGGTGCTGGTGGCCAAGA CGGTGGGCGGCGATGTGTTCTACGGCTTCATCTCGGCCGTGGCGTTTGCCACGATTCTGGCGGTGGTGGCAGGGCTCACG CTGTCGGGTGCATCGGCGGTGTCGCATGATCTTTACGCCACGGTCTTCAAGCACGGCAAGGCCAACAGCGCCGACGAGCT GAAGGTCTCGCGCATCACCACGCTGGTGCTGGGCGTGATCGCTGTGCTGCTGGGCATCGCTTTCGAGAAGCAGAACATCG CGTTCATGGTGTCGCTGGCGTTTGCGGTGGCGGCATCGGCCAACTTTCCGGTGTTGTTCCTCTCGATGCTGTGGAAGGGC TGTACCACGCGTGGTGCGGTTATCGGCGGGTTCCTGGGGCTGATCTCGTCGGTGGGTCTGACGATCGTTTCGCCGTCGGT GTGGGAGGCCACGCTCGGCTATCCGAAGGGCTCGGCGTGGTTCCCGTACACGTCGCCCGCGCTGTTCTCGATGACGATCG GCTTCGTGGGCGTGTGGCTGTTCTCGGTGCTGGACAGCAGCGTTCGCGCCAAGAACGAGAAGGCGTCGTTTGCCGCGCAG CAGGTCCGCTCGGAAACGGGCCTCGGTGCGGCTGGCGCATCGGGCCACTGA
Upstream 100 bases:
>100_bases CGGTCATCATCTTCACCGTCGTCATTACCGGCATCTACGTGCGCCGCGCCAACAGCGAATACGATCAACTGACGCAGGAC ATCCTGAAGGACGTCGCCAA
Downstream 100 bases:
>100_bases TCGGCCACTGGCCACGCTGACTGGAGGCGGGTGACGCATTGCATCGCCCGCCTTCAAGGCAACCATGCCCAGCGCTTTCA ACTTCGCCGTCTGGCCATTC
Product: sodium solute transporter superfamily protein
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAKRTRSAADFYTAGGGITGFQN GLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWPIITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTL VVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKEARKSVFW ATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLT LSGASAVSHDLYATVFKHGKANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWLFSVLDSSVRAKNEKASFAAQ QVRSETGLGAAGASGH
Sequences:
>Translated_576_residues MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAKRTRSAADFYTAGGGITGFQN GLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWPIITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTL VVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKEARKSVFW ATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLT LSGASAVSHDLYATVFKHGKANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWLFSVLDSSVRAKNEKASFAAQ QVRSETGLGAAGASGH >Mature_576_residues MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAKRTRSAADFYTAGGGITGFQN GLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWPIITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTL VVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKEARKSVFW ATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLT LSGASAVSHDLYATVFKHGKANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWLFSVLDSSVRAKNEKASFAAQ QVRSETGLGAAGASGH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=440, Percent_Identity=23.4090909090909, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI1790503, Length=576, Percent_Identity=62.8472222222222, Blast_Score=687, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=477, Percent_Identity=24.9475890985325, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 60095; Mature: 60095
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAK CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RTRSAADFYTAGGGITGFQNGLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWP HHCCHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTLVVVAFYLIAQMVGAGQLIKL HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPH HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHH ILMRFFTVPDAKEARKSVFWATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCC AGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLTLSGASAVSHDLYATVFKHGK CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC ANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHC CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWL CCCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FSVLDSSVRAKNEKASFAAQQVRSETGLGAAGASGH HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAK CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RTRSAADFYTAGGGITGFQNGLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWP HHCCHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTLVVVAFYLIAQMVGAGQLIKL HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPH HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHH ILMRFFTVPDAKEARKSVFWATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCC AGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLTLSGASAVSHDLYATVFKHGK CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC ANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHC CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWL CCCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FSVLDSSVRAKNEKASFAAQQVRSETGLGAAGASGH HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA