| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918660
Identifier: 187918660
GI number: 187918660
Start: 864638
End: 866137
Strand: Direct
Name: 187918660
Synonym: BH0806
Alternate gene names: NA
Gene position: 864638-866137 (Clockwise)
Preceding gene: 187918659
Following gene: 187918661
Centisome position: 93.75
GC content: 26.8
Gene sequence:
>1500_bases ATGAAATTTGTAAATTATATAAATAATATTTTTAAAAATAAGCTTGTTTTTATGAGCTTATTTTTCTTTTTCTCATGTCT GACTAGTAGAGATACTAATTTATCTATTGTTGTCGATGATGTTCAAAATTCAAATGTTGATGAATTAGATGTTAATGAGA GAAGTCGTTTATTAGGACTTAAAGATGATGAATCTTTTTTCTTAAGTGATGCCTTTTTAAAAGAGGATAATTTTTATTTT AAGAGTGCTAGGGAAAGTTATGCCCAAAAAAATTTTGGCATGACCACTTACTATTTAAATAAAATAGTAAGTGATGAGAA AAGTTATGGTAAAGAATTACTAGCTAAAGCCAATTTGTTTTTTGGTTATGTAAATTATAATATGGGTGTTTATGATCTCT CTGAATATAATTTTGATAATTTTTTAAAATATTATAAATATTCTCATGCTAGTCTTAGGGCTGCTGAACTTAAATATTTT GTTAAGGATAGAATAGGTGCAATCTCTGCATTAAGGGATATTGATAAAACTTCTCTTAATGCAGACTATGATCGAGGAAT TTATAATTTTTTGAATGATAAATTTGGAATAAATTATTTAAATTTAGAAGCTTTAGGATTTTTAGATAATAGTATTTTTG ATATGTTTATTTCAGGGAGTAATATTTTTATTTCAAATATATTTGGTGGTCTCTTAAGATATGATGTTAAGAGCAATGAA TATAAAGTTTATATTAAAGACAAGAAAAGTATTGTTTTAAATGGACTTAAAGGATTTGCAGAGCATAAAGGAGTTATATA CGTTGGTGGCTCTAATGCTCTTTATTATATTGATGATTTGGAAGGTTCTATCAAGCAAGTTAAAATACCTTTAAAGGTTA ACTTAAATAGTATACAAGTTTTGCTGGGCGCTAAAGATGGAATTTTTGTTGGTACTCTAGATTCTGGACTATGGTTTTAT TCTGATGTAGGTGAGTGGACTTATATTAAAGTTGGTTCTAATAGGATCTCATCACTGTATTTAGATGAACAAAAAAATTT ATTATTGATAGGAACAATGGATAAATCTATTTATAGCATTGATCTAGCTGATTTTAACAACGTTAAACATTTGAATTTTT TTAGCAAGGTAGAGAGTGAGAGCAATATTAATTTTATAAAGAAGCATGATGGTGGTTATTACGTTGGAACTTATGGAGGT GGTCTTTTTAAGTTAAATTTAGATAATCATACATATGTAAAATGTGACGTTAACAATGATCCTAGCATTGGGTATTTTCT TGATATGGAGATTAGGGATAATAAGTTATTATTTGCAACTTTTGAGCATGGTTTATTAATTTACGATACAGTAAACGCTA GTTGGGATTATCTAGGTCCTGGTGATGGGCTTATTAGTTTAAATTTAGTTAAAATTTTAAATTTTGATGATTATGTTATA CTTGGAACTTTAAATAATGGTTTGGTTTTTGTAAATGAGAGTATTAAGAAACAATTATGA
Upstream 100 bases:
>100_bases CTCCAAGATTAGAGGAGGGCCAAATTGTGAAGGTCAAAATATCTGATATCGATAAGTTTGGCAAGATTGAGCTTGAATTA GTTAGAGATTAATAAGTGTT
Downstream 100 bases:
>100_bases ATCTTACATAATTACTGAATTTTGTAAGTATTTCTTAATTACTTTTTTATTTTTTTTCTTTGTTTTTTTCATAAACCAAA TACTTTTTTTTATGAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKFVNYINNIFKNKLVFMSLFFFFSCLTSRDTNLSIVVDDVQNSNVDELDVNERSRLLGLKDDESFFLSDAFLKEDNFYF KSARESYAQKNFGMTTYYLNKIVSDEKSYGKELLAKANLFFGYVNYNMGVYDLSEYNFDNFLKYYKYSHASLRAAELKYF VKDRIGAISALRDIDKTSLNADYDRGIYNFLNDKFGINYLNLEALGFLDNSIFDMFISGSNIFISNIFGGLLRYDVKSNE YKVYIKDKKSIVLNGLKGFAEHKGVIYVGGSNALYYIDDLEGSIKQVKIPLKVNLNSIQVLLGAKDGIFVGTLDSGLWFY SDVGEWTYIKVGSNRISSLYLDEQKNLLLIGTMDKSIYSIDLADFNNVKHLNFFSKVESESNINFIKKHDGGYYVGTYGG GLFKLNLDNHTYVKCDVNNDPSIGYFLDMEIRDNKLLFATFEHGLLIYDTVNASWDYLGPGDGLISLNLVKILNFDDYVI LGTLNNGLVFVNESIKKQL
Sequences:
>Translated_499_residues MKFVNYINNIFKNKLVFMSLFFFFSCLTSRDTNLSIVVDDVQNSNVDELDVNERSRLLGLKDDESFFLSDAFLKEDNFYF KSARESYAQKNFGMTTYYLNKIVSDEKSYGKELLAKANLFFGYVNYNMGVYDLSEYNFDNFLKYYKYSHASLRAAELKYF VKDRIGAISALRDIDKTSLNADYDRGIYNFLNDKFGINYLNLEALGFLDNSIFDMFISGSNIFISNIFGGLLRYDVKSNE YKVYIKDKKSIVLNGLKGFAEHKGVIYVGGSNALYYIDDLEGSIKQVKIPLKVNLNSIQVLLGAKDGIFVGTLDSGLWFY SDVGEWTYIKVGSNRISSLYLDEQKNLLLIGTMDKSIYSIDLADFNNVKHLNFFSKVESESNINFIKKHDGGYYVGTYGG GLFKLNLDNHTYVKCDVNNDPSIGYFLDMEIRDNKLLFATFEHGLLIYDTVNASWDYLGPGDGLISLNLVKILNFDDYVI LGTLNNGLVFVNESIKKQL >Mature_499_residues MKFVNYINNIFKNKLVFMSLFFFFSCLTSRDTNLSIVVDDVQNSNVDELDVNERSRLLGLKDDESFFLSDAFLKEDNFYF KSARESYAQKNFGMTTYYLNKIVSDEKSYGKELLAKANLFFGYVNYNMGVYDLSEYNFDNFLKYYKYSHASLRAAELKYF VKDRIGAISALRDIDKTSLNADYDRGIYNFLNDKFGINYLNLEALGFLDNSIFDMFISGSNIFISNIFGGLLRYDVKSNE YKVYIKDKKSIVLNGLKGFAEHKGVIYVGGSNALYYIDDLEGSIKQVKIPLKVNLNSIQVLLGAKDGIFVGTLDSGLWFY SDVGEWTYIKVGSNRISSLYLDEQKNLLLIGTMDKSIYSIDLADFNNVKHLNFFSKVESESNINFIKKHDGGYYVGTYGG GLFKLNLDNHTYVKCDVNNDPSIGYFLDMEIRDNKLLFATFEHGLLIYDTVNASWDYLGPGDGLISLNLVKILNFDDYVI LGTLNNGLVFVNESIKKQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57034; Mature: 57034
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVNYINNIFKNKLVFMSLFFFFSCLTSRDTNLSIVVDDVQNSNVDELDVNERSRLLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCHHHEECC KDDESFFLSDAFLKEDNFYFKSARESYAQKNFGMTTYYLNKIVSDEKSYGKELLAKANLF CCCCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCEEE FGYVNYNMGVYDLSEYNFDNFLKYYKYSHASLRAAELKYFVKDRIGAISALRDIDKTSLN EEEEECCCCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHCCC ADYDRGIYNFLNDKFGINYLNLEALGFLDNSIFDMFISGSNIFISNIFGGLLRYDVKSNE CCCCCCHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHHHEEEEECCCE YKVYIKDKKSIVLNGLKGFAEHKGVIYVGGSNALYYIDDLEGSIKQVKIPLKVNLNSIQV EEEEEECCCEEEEECHHHHHHCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCEEEE LLGAKDGIFVGTLDSGLWFYSDVGEWTYIKVGSNRISSLYLDEQKNLLLIGTMDKSIYSI EEECCCCEEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEE DLADFNNVKHLNFFSKVESESNINFIKKHDGGYYVGTYGGGLFKLNLDNHTYVKCDVNND EECCCCCEEEEEHHHHHCCCCCCCEEEECCCCEEEEECCCEEEEEECCCCEEEEEECCCC PSIGYFLDMEIRDNKLLFATFEHGLLIYDTVNASWDYLGPGDGLISLNLVKILNFDDYVI CCEEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEE LGTLNNGLVFVNESIKKQL EEECCCCEEEEEHHHHHCC >Mature Secondary Structure MKFVNYINNIFKNKLVFMSLFFFFSCLTSRDTNLSIVVDDVQNSNVDELDVNERSRLLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCHHHEECC KDDESFFLSDAFLKEDNFYFKSARESYAQKNFGMTTYYLNKIVSDEKSYGKELLAKANLF CCCCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCEEE FGYVNYNMGVYDLSEYNFDNFLKYYKYSHASLRAAELKYFVKDRIGAISALRDIDKTSLN EEEEECCCCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHCCC ADYDRGIYNFLNDKFGINYLNLEALGFLDNSIFDMFISGSNIFISNIFGGLLRYDVKSNE CCCCCCHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHHHEEEEECCCE YKVYIKDKKSIVLNGLKGFAEHKGVIYVGGSNALYYIDDLEGSIKQVKIPLKVNLNSIQV EEEEEECCCEEEEECHHHHHHCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCEEEE LLGAKDGIFVGTLDSGLWFYSDVGEWTYIKVGSNRISSLYLDEQKNLLLIGTMDKSIYSI EEECCCCEEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEE DLADFNNVKHLNFFSKVESESNINFIKKHDGGYYVGTYGGGLFKLNLDNHTYVKCDVNND EECCCCCEEEEEHHHHHCCCCCCCEEEECCCCEEEEECCCEEEEEECCCCEEEEEECCCC PSIGYFLDMEIRDNKLLFATFEHGLLIYDTVNASWDYLGPGDGLISLNLVKILNFDDYVI CCEEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEE LGTLNNGLVFVNESIKKQL EEECCCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA