Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918661

Identifier: 187918661

GI number: 187918661

Start: 866112

End: 867401

Strand: Direct

Name: 187918661

Synonym: BH0807

Alternate gene names: NA

Gene position: 866112-867401 (Clockwise)

Preceding gene: 187918660

Following gene: 187918662

Centisome position: 93.91

GC content: 25.97

Gene sequence:

>1290_bases
ATGAGAGTATTAAGAAACAATTATGAATCTTACATAATTACTGAATTTTGTAAGTATTTCTTAATTACTTTTTTATTTTT
TTTCTTTGTTTTTTTCATAAACCAAATACTTTTTTTTATGAGAATACTTCTTCAAAACTATGTTCCTTTTTTCAAGGCTT
TTATTTTTGTTATATATTCGCTTCCTATGGTAATTGCCCTTTCTCCTCCCTTTGCAGCTTTACTCTCAGTAATACTTACC
ATTTATAGGTTTAAACTTAATAATGAAATATTGGCTTTTAGATCAATTGGAATATCTATTTTTGATTTGTTAGTTCCATT
TTTTAAATTAGGTGTGGTTATTGCATTAATTGCGTTTATTTTAAATGATTTTTTGCTGCCACTTGGTTCTATTGGTAGGT
TAAAAATTTTTAATGAAATCAAAGAAGAAATACCTCATTTGATATTAAAACCCTATTCAAGCAAACAGTATGGAGATTTA
ATATTTGTATCAGGAGAGAAATCTGATACAGGATATAGAAATGTTACTTTTTTTGATAATACTAGACTTAAAGGCTATGA
CAGAATATTTATGGCAAGGGAACTTAATATTCAGAAAGAAAATTATCAGGTATATTTTATTTTGAACGATGTTTTATCAA
TTGCTTTAACAGAAGATGAGAGTGGATTTTATGACTATTTTTATGCTGATCGAATGAAATATTCAATTGATCAAGTCACA
TTTAGTGATAGTTGGCTGTTAAGTAATGTAACACCATCTCAGATGAGTATGAGAGATGTTATTAAACTTATTGTTAAGCA
AGATAAGCTAGTTAAAGAGTTAGATATGAGAAATGATTTAGAAGAAGATCTTTTGCATTTAAATTTTTCAAATACTTATT
TAAATTATTTGTATGCTACAAATAGCATTGTAGATGAGAATTATTTTCTTGAAAACTTAAATTATATGTATAATTTAAGT
TTAAATTATAGTCCTTATGAGGATCTACTTGCTAAGAGAAGTTATGCTCTTTTTTATTTGGAATTTTATCAAAAAATAAG
TTTACCATTGTCTGTTTTATTTTTCATCTTTTTAGCTTTCGGTATGGGTATGTACTCAAATAAAAAATATTCTATTATTC
TTGAACTTGTGATTTCAATTCTTATTTGTGTTTTCTATTGGGTAATGTTTATTGGTGGAAAAGTTTATACTGTTCAGTAT
GCCCCAAATCCTTTTCTTGTTACTGTTTTGCCAAATGTGGCTTTAATTTTTGCAGGTTTAATACTTTTTTTGAGACTTTT
AAAAAAATGA

Upstream 100 bases:

>100_bases
GGTCCTGGTGATGGGCTTATTAGTTTAAATTTAGTTAAAATTTTAAATTTTGATGATTATGTTATACTTGGAACTTTAAA
TAATGGTTTGGTTTTTGTAA

Downstream 100 bases:

>100_bases
AAGTAGATAAGCTTTTTGTAAATAATATATCATTAACTTTTTTGTTTATGAATTTTCTCTTTGTGATTTTAATTGTGCTT
TTTGATTTATTTACAAATCT

Product: hypothetical membrane spanning protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRVLRNNYESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVIALSPPFAALLSVILT
IYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLPLGSIGRLKIFNEIKEEIPHLILKPYSSKQYGDL
IFVSGEKSDTGYRNVTFFDNTRLKGYDRIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVT
FSDSWLLSNVTPSQMSMRDVIKLIVKQDKLVKELDMRNDLEEDLLHLNFSNTYLNYLYATNSIVDENYFLENLNYMYNLS
LNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQY
APNPFLVTVLPNVALIFAGLILFLRLLKK

Sequences:

>Translated_429_residues
MRVLRNNYESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVIALSPPFAALLSVILT
IYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLPLGSIGRLKIFNEIKEEIPHLILKPYSSKQYGDL
IFVSGEKSDTGYRNVTFFDNTRLKGYDRIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVT
FSDSWLLSNVTPSQMSMRDVIKLIVKQDKLVKELDMRNDLEEDLLHLNFSNTYLNYLYATNSIVDENYFLENLNYMYNLS
LNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQY
APNPFLVTVLPNVALIFAGLILFLRLLKK
>Mature_429_residues
MRVLRNNYESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYSLPMVIALSPPFAALLSVILT
IYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLPLGSIGRLKIFNEIKEEIPHLILKPYSSKQYGDL
IFVSGEKSDTGYRNVTFFDNTRLKGYDRIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVT
FSDSWLLSNVTPSQMSMRDVIKLIVKQDKLVKELDMRNDLEEDLLHLNFSNTYLNYLYATNSIVDENYFLENLNYMYNLS
LNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQY
APNPFLVTVLPNVALIFAGLILFLRLLKK

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50560; Mature: 50560

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00256 AKH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLRNNYESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYS
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPMVIALSPPFAALLSVILTIYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFI
HHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDFLLPLGSIGRLKIFNEIKEEIPHLILKPYSSKQYGDLIFVSGEKSDTGYRNVTFFDN
HHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCCCCCEEEEECC
TRLKGYDRIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVT
CCCCCHHHEEEHHCCCEEECCEEEEEEEHHHHHEEEECCCCCCCHHHHHHHHHHHHHHEE
FSDSWLLSNVTPSQMSMRDVIKLIVKQDKLVKELDMRNDLEEDLLHLNFSNTYLNYLYAT
ECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCHHHHHHHEEC
NSIVDENYFLENLNYMYNLSLNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLAF
CCHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQYAPNPFLVTVLPNVALIFAGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHHHH
ILFLRLLKK
HHHHHHHCC
>Mature Secondary Structure
MRVLRNNYESYIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNYVPFFKAFIFVIYS
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPMVIALSPPFAALLSVILTIYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFI
HHHHEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDFLLPLGSIGRLKIFNEIKEEIPHLILKPYSSKQYGDLIFVSGEKSDTGYRNVTFFDN
HHHHHHCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCCCCCEEEEECC
TRLKGYDRIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVT
CCCCCHHHEEEHHCCCEEECCEEEEEEEHHHHHEEEECCCCCCCHHHHHHHHHHHHHHEE
FSDSWLLSNVTPSQMSMRDVIKLIVKQDKLVKELDMRNDLEEDLLHLNFSNTYLNYLYAT
ECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCHHHHHHHEEC
NSIVDENYFLENLNYMYNLSLNYSPYEDLLAKRSYALFYLEFYQKISLPLSVLFFIFLAF
CCHHCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQYAPNPFLVTVLPNVALIFAGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHHHH
ILFLRLLKK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA