| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is hemK [C]
Identifier: 187918070
GI number: 187918070
Start: 193639
End: 194472
Strand: Direct
Name: hemK [C]
Synonym: BH0197
Alternate gene names: 187918070
Gene position: 193639-194472 (Clockwise)
Preceding gene: 187918069
Following gene: 187918071
Centisome position: 21.0
GC content: 29.86
Gene sequence:
>834_bases ATGACAATAAACGAAGCAATAAAGAGTTCAAAACAACATAACTTAAATACTCTTGAGATTTTATTACTACTTGAAAAAAT CTTAAAGAATCGAAAAGAATTAATTCTGGCAAATACAAATAAGACTTTAACAAAACAAGAAGAACATAAATTACTGAGTC AAATAAAAAACATAAAATCAGGCACACCCATAAACTACATACTTGGAACAAAGGAATTCATGGGAATCAAGTTTTACATA AACAAACATGTGCTAATTCCTAGAGCAGATACAGAATGCCTAGTAGAAGAAGCTTTAATTCAAATTAAAAAGCACAACTT AAATAGAATCTTAGATTTATGTTGCGGGAGTGGGTGCATTGGATTAACAATTGCATATTATCTTAAGCGCAAAGTAACAC TATCAGATATTTCGACTAAAGCCTTAAGGGTATCATTAAGAAACACACAAAGACTAAAATTAGAAAATTATATAGAAATA CAACATTCGGATCTGTTAAAATACATAGATAAAGAGTTTGAGCTAATAATCACTAATCCTCCTTATTTAAATAAAGATGA ACTAAAAATAAAGGAAAAATTAGCAAAAGAACCAAGAATAGCTCTTTTAGGATTTGGAAGAGATGGGCTTAAGATTCCAA AAAAAATAATAATACAGGCAAAACATAAGCTCACCAAAAATGGCCTCTTAATAGTAGAAATGGCTCCATGGCAAACAAAC TCTCTAAAAAAATTTGCAATCCAGGAAGGTTTTGAATATTTGAAAACCATATATGACATTGAAAACAGAGAAAGGGCATT GGTCCTAAGGATAAAGCATGATACAAGTCTATGA
Upstream 100 bases:
>100_bases AGAAGAAATTATGCAAGGAGAACTTGATTTTCTTCTCGACACACTAGCTCTAAAATTTCAAGAACAATCACTAAAAGATA ATTCAATTTAATTTCTTCTA
Downstream 100 bases:
>100_bases AATTGCATACCTACTTAAAATAAATGATATTGATAAACTAAAAAACATTTTTAGAAAAATTGTCAATAATACTTATCAAG ATGAGATTCAAAAAAAATTA
Product: peptide release factor-glutamine N5-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTINEAIKSSKQHNLNTLEILLLLEKILKNRKELILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYI NKHVLIPRADTECLVEEALIQIKKHNLNRILDLCCGSGCIGLTIAYYLKRKVTLSDISTKALRVSLRNTQRLKLENYIEI QHSDLLKYIDKEFELIITNPPYLNKDELKIKEKLAKEPRIALLGFGRDGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTN SLKKFAIQEGFEYLKTIYDIENRERALVLRIKHDTSL
Sequences:
>Translated_277_residues MTINEAIKSSKQHNLNTLEILLLLEKILKNRKELILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYI NKHVLIPRADTECLVEEALIQIKKHNLNRILDLCCGSGCIGLTIAYYLKRKVTLSDISTKALRVSLRNTQRLKLENYIEI QHSDLLKYIDKEFELIITNPPYLNKDELKIKEKLAKEPRIALLGFGRDGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTN SLKKFAIQEGFEYLKTIYDIENRERALVLRIKHDTSL >Mature_276_residues TINEAIKSSKQHNLNTLEILLLLEKILKNRKELILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYIN KHVLIPRADTECLVEEALIQIKKHNLNRILDLCCGSGCIGLTIAYYLKRKVTLSDISTKALRVSLRNTQRLKLENYIEIQ HSDLLKYIDKEFELIITNPPYLNKDELKIKEKLAKEPRIALLGFGRDGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTNS LKKFAIQEGFEYLKTIYDIENRERALVLRIKHDTSL
Specific function: Methylates The Translation Termination Release Factor Rf1 On Gln-235 And Rf2 On Gln-252. [C]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=194, Percent_Identity=31.9587628865979, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787463, Length=271, Percent_Identity=28.7822878228782, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082085, Length=198, Percent_Identity=32.8282828282828, Blast_Score=110, Evalue=8e-26, Organism=Drosophila melanogaster, GI24582226, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32039; Mature: 31908
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINEAIKSSKQHNLNTLEILLLLEKILKNRKELILANTNKTLTKQEEHKLLSQIKNIKS CCHHHHHHCHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC GTPINYILGTKEFMGIKFYINKHVLIPRADTECLVEEALIQIKKHNLNRILDLCCGSGCI CCCEEEEECCHHHEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GLTIAYYLKRKVTLSDISTKALRVSLRNTQRLKLENYIEIQHSDLLKYIDKEFELIITNP HHHHHHHHHHCCCHHHCCHHHHEEECCCCCEEEHHHHEEEHHHHHHHHHCCCCEEEECCC PYLNKDELKIKEKLAKEPRIALLGFGRDGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTN CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC SLKKFAIQEGFEYLKTIYDIENRERALVLRIKHDTSL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC >Mature Secondary Structure TINEAIKSSKQHNLNTLEILLLLEKILKNRKELILANTNKTLTKQEEHKLLSQIKNIKS CHHHHHHCHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC GTPINYILGTKEFMGIKFYINKHVLIPRADTECLVEEALIQIKKHNLNRILDLCCGSGCI CCCEEEEECCHHHEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GLTIAYYLKRKVTLSDISTKALRVSLRNTQRLKLENYIEIQHSDLLKYIDKEFELIITNP HHHHHHHHHHCCCHHHCCHHHHEEECCCCCEEEHHHHEEEHHHHHHHHHCCCCEEEECCC PYLNKDELKIKEKLAKEPRIALLGFGRDGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTN CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC SLKKFAIQEGFEYLKTIYDIENRERALVLRIKHDTSL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]