Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918013

Identifier: 187918013

GI number: 187918013

Start: 131967

End: 133112

Strand: Direct

Name: 187918013

Synonym: BH0134

Alternate gene names: NA

Gene position: 131967-133112 (Clockwise)

Preceding gene: 187917995

Following gene: 187918015

Centisome position: 14.31

GC content: 26.27

Gene sequence:

>1146_bases
ATGAAAATGGAACCTAATAAACTTATTAATAAATCTATTCGCTATTATAACTCTCACAAATATTCAGATGTAATAAAACT
TTTAGAAAAAGAAATTTTCTTTTATAAAAATTATTATTTTTATCATTATATCCTAGGAATGTCTTATCTTAGAATGGGAA
ATCTAGGAAATGCTCAAACATATCTAAAGAAAGCTTACACTTTAAATCCAACAGAACCAGATGTCAAGCAATCAATCGCA
ATACTATTAGCAGCTCAAGGCAAAGAGGACAAGGCCATACAGATATGGCTTAAAATGATAGAAGAAAATCAAGAAATCAA
ACGATCAGAACTTTCTTTAGAAACTATTCGAAAAAATCCTATTCAAGGAACACTATTTATGAATAAAAACAAAATATATG
CCAAACTATTTCCAGAAATCAAAATAGAAACAGGACAAAATTTATCTAAGTTAATAAGAATATTATTAACAGTAGCAGGC
CTTGTATTCTCATTGATATCAATATTTTTATTTATACGTTCCAAAGAAACAACTACACTGACATCAAATGATTCTAAGGT
AAAAGAAAAAAAAGCTATTAATAATATTGCAGCATACATTGACGATATTAAAATAAATGAGAAAGAAAAAATTGAAAACC
ATGAGGGGCAATTTGTATTCATACTCACTGAAACTGAAATCAAAAATTCATTTCAAAAAATAAAAACTCATCTAAAAAAA
GGCAAAAATAATTTTGCAAGAATCGAAATAAATAAGATATTAAATTCAAACGCATCGGAATCAATTAAACTTAAAGCTAA
AAATCTTGCAAGTTTTATCTCAAGACCAGATTTTATTACATTTGACGATTATTTAGTTTTAAAAGAAATTAAAAAAAACC
CATTAATTTACTCAAATATATATGTCAAATGGGAAGGAATTGCAAACAATATCGAAAAGAAAGATAATATAACTTACTTT
GACTTTTATGTAGGATATAACAAGAACGCTCTTGAAGGCATAATAACAACAAAAACAACTTTTGATATTGATATCAATTT
TAAAGATTGTGTTGAAATACTTGGACAAATAAACTATGACTACAACACAAACACATTGACTCTAAATGCAATCACAATCC
GCAAAATAGAAAAACAAAAGGGTTAA

Upstream 100 bases:

>100_bases
ACTTTTTTAAAACAAAAAACGATATTCTATTTATTATTTTTTTAAGATAAAATTTATATATCAAACATTAAAACTAATAT
CATGAGGGTAACTTCAACTT

Downstream 100 bases:

>100_bases
TATGCCTACTAATGCTTTTAAGAACGCAAAATCACTAAAACTTAAATACCTTCAAATTAAAAATATCTTTTTAAAATTAT
CATTTAATTAAAAAGGCGTA

Product: tetratricopeptide repeat family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA
ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG
LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK
GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF
DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG

Sequences:

>Translated_381_residues
MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA
ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG
LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK
GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF
DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG
>Mature_381_residues
MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA
ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG
LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK
GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF
DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44375; Mature: 44375

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQT
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YLKKAYTLNPTEPDVKQSIAILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNP
HHHHHEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
IQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAGLVFSLISIFLFIRSKETTTL
CCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK
ECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHC
GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNI
CCCCEEEEEEEHHHCCCCCCEEEEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEE
YVKWEGIANNIEKKDNITYFDFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYD
EEEEECCCCCCCCCCCCEEEEEEECCCCCHHCEEEEEEEEEEEECCHHHHHHHHHHCCCC
YNTNTLTLNAITIRKIEKQKG
CCCCEEEEEEEEEEEHHHCCC
>Mature Secondary Structure
MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQT
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YLKKAYTLNPTEPDVKQSIAILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNP
HHHHHEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
IQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAGLVFSLISIFLFIRSKETTTL
CCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK
ECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHC
GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNI
CCCCEEEEEEEHHHCCCCCCEEEEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEE
YVKWEGIANNIEKKDNITYFDFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYD
EEEEECCCCCCCCCCCCEEEEEEECCCCCHHCEEEEEEEEEEEECCHHHHHHHHHHCCCC
YNTNTLTLNAITIRKIEKQKG
CCCCEEEEEEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA