| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is 187918013
Identifier: 187918013
GI number: 187918013
Start: 131967
End: 133112
Strand: Direct
Name: 187918013
Synonym: BH0134
Alternate gene names: NA
Gene position: 131967-133112 (Clockwise)
Preceding gene: 187917995
Following gene: 187918015
Centisome position: 14.31
GC content: 26.27
Gene sequence:
>1146_bases ATGAAAATGGAACCTAATAAACTTATTAATAAATCTATTCGCTATTATAACTCTCACAAATATTCAGATGTAATAAAACT TTTAGAAAAAGAAATTTTCTTTTATAAAAATTATTATTTTTATCATTATATCCTAGGAATGTCTTATCTTAGAATGGGAA ATCTAGGAAATGCTCAAACATATCTAAAGAAAGCTTACACTTTAAATCCAACAGAACCAGATGTCAAGCAATCAATCGCA ATACTATTAGCAGCTCAAGGCAAAGAGGACAAGGCCATACAGATATGGCTTAAAATGATAGAAGAAAATCAAGAAATCAA ACGATCAGAACTTTCTTTAGAAACTATTCGAAAAAATCCTATTCAAGGAACACTATTTATGAATAAAAACAAAATATATG CCAAACTATTTCCAGAAATCAAAATAGAAACAGGACAAAATTTATCTAAGTTAATAAGAATATTATTAACAGTAGCAGGC CTTGTATTCTCATTGATATCAATATTTTTATTTATACGTTCCAAAGAAACAACTACACTGACATCAAATGATTCTAAGGT AAAAGAAAAAAAAGCTATTAATAATATTGCAGCATACATTGACGATATTAAAATAAATGAGAAAGAAAAAATTGAAAACC ATGAGGGGCAATTTGTATTCATACTCACTGAAACTGAAATCAAAAATTCATTTCAAAAAATAAAAACTCATCTAAAAAAA GGCAAAAATAATTTTGCAAGAATCGAAATAAATAAGATATTAAATTCAAACGCATCGGAATCAATTAAACTTAAAGCTAA AAATCTTGCAAGTTTTATCTCAAGACCAGATTTTATTACATTTGACGATTATTTAGTTTTAAAAGAAATTAAAAAAAACC CATTAATTTACTCAAATATATATGTCAAATGGGAAGGAATTGCAAACAATATCGAAAAGAAAGATAATATAACTTACTTT GACTTTTATGTAGGATATAACAAGAACGCTCTTGAAGGCATAATAACAACAAAAACAACTTTTGATATTGATATCAATTT TAAAGATTGTGTTGAAATACTTGGACAAATAAACTATGACTACAACACAAACACATTGACTCTAAATGCAATCACAATCC GCAAAATAGAAAAACAAAAGGGTTAA
Upstream 100 bases:
>100_bases ACTTTTTTAAAACAAAAAACGATATTCTATTTATTATTTTTTTAAGATAAAATTTATATATCAAACATTAAAACTAATAT CATGAGGGTAACTTCAACTT
Downstream 100 bases:
>100_bases TATGCCTACTAATGCTTTTAAGAACGCAAAATCACTAAAACTTAAATACCTTCAAATTAAAAATATCTTTTTAAAATTAT CATTTAATTAAAAAGGCGTA
Product: tetratricopeptide repeat family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG
Sequences:
>Translated_381_residues MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG >Mature_381_residues MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQTYLKKAYTLNPTEPDVKQSIA ILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNPIQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAG LVFSLISIFLFIRSKETTTLTSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNIYVKWEGIANNIEKKDNITYF DFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYDYNTNTLTLNAITIRKIEKQKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44375; Mature: 44375
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQT CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLKKAYTLNPTEPDVKQSIAILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNP HHHHHEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC IQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAGLVFSLISIFLFIRSKETTTL CCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK ECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHC GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNI CCCCEEEEEEEHHHCCCCCCEEEEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEE YVKWEGIANNIEKKDNITYFDFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYD EEEEECCCCCCCCCCCCEEEEEEECCCCCHHCEEEEEEEEEEEECCHHHHHHHHHHCCCC YNTNTLTLNAITIRKIEKQKG CCCCEEEEEEEEEEEHHHCCC >Mature Secondary Structure MKMEPNKLINKSIRYYNSHKYSDVIKLLEKEIFFYKNYYFYHYILGMSYLRMGNLGNAQT CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLKKAYTLNPTEPDVKQSIAILLAAQGKEDKAIQIWLKMIEENQEIKRSELSLETIRKNP HHHHHEECCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC IQGTLFMNKNKIYAKLFPEIKIETGQNLSKLIRILLTVAGLVFSLISIFLFIRSKETTTL CCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE TSNDSKVKEKKAINNIAAYIDDIKINEKEKIENHEGQFVFILTETEIKNSFQKIKTHLKK ECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHC GKNNFARIEINKILNSNASESIKLKAKNLASFISRPDFITFDDYLVLKEIKKNPLIYSNI CCCCEEEEEEEHHHCCCCCCEEEEEHHHHHHHHCCCCEEEECCHHHHHHHCCCCEEEEEE YVKWEGIANNIEKKDNITYFDFYVGYNKNALEGIITTKTTFDIDINFKDCVEILGQINYD EEEEECCCCCCCCCCCCEEEEEEECCCCCHHCEEEEEEEEEEEECCHHHHHHHHHHCCCC YNTNTLTLNAITIRKIEKQKG CCCCEEEEEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA