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The map label for this gene is yqfA [C]

Identifier: 187917995

GI number: 187917995

Start: 115070

End: 115759

Strand: Direct

Name: yqfA [C]

Synonym: BH0117

Alternate gene names: 187917995

Gene position: 115070-115759 (Clockwise)

Preceding gene: 187917988

Following gene: 187918013

Centisome position: 12.48

GC content: 29.42

Gene sequence:

>690_bases
ATGTTCAAAAAAAAGAAAAAACACAAATCATATCATGCCTCAATACCTAAAAATGAATTGTTCAGCTCAATATCTCACCT
AATTGGCATTATTTTATCAATAATAGGAACAACAATTCTTATTACTCTATCAATTAATTCAGAAAAGTATCTTCATGCAG
TATTATTTCTTATCTATGGCTCATCAATGACATTACTATATACAATGAGTACTCTTTATCATATGTTTACAAGGGGAAGT
AAAATAAAACAACTTTTTAGAAAATTTGATCATATCTCAATATTCATATTGATAGCAGGAACATACACTCCACCATGTCT
AATTCTTATGCCGAATGTTTATGGAAAAATAATCCTTATAGCCGTTTGGGGATTTGCTATTCTAGGAATTATTTTTAAGT
CAATATACATAAACAGTCCCGGATGGATTAACGGATGCATATTCATACTTATGGGATGGAGTATTATATTTGGAATTAAA
CTCATTTATGAAATCCTTCCTATAAAAGGATTTGTATGGCTAGGCCTAGGGGGTATTCTTTATACACTAGGAGGAATAGT
ATACTCAACAAGTAAAAAACTTAATCCAATAGCAAACATGAGAATGCATGATCTTTTTCACATTTTAATCTTACTTGCAT
CTTTTGCTCACTTTTGGTTTATGTTAAAATATGTGCTTCCTATTAATTAA

Upstream 100 bases:

>100_bases
CTTGCTCACTTGATTTATGTCTTTTTTTGCATTAATATACCTAAAATAAATAAGAACAAATGTATGTTCTAAATAAAAAT
AATTAGAAAAGAGTAAACCC

Downstream 100 bases:

>100_bases
AGAGCAAACGGCTTCTGCTTGAACAAACTAAATCTTGAACAAACTAAATAATTAGATTAAATTACGTAAGTCATTTAAAA
ACCCTAATACAAAAAGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MFKKKKKHKSYHASIPKNELFSSISHLIGIILSIIGTTILITLSINSEKYLHAVLFLIYGSSMTLLYTMSTLYHMFTRGS
KIKQLFRKFDHISIFILIAGTYTPPCLILMPNVYGKIILIAVWGFAILGIIFKSIYINSPGWINGCIFILMGWSIIFGIK
LIYEILPIKGFVWLGLGGILYTLGGIVYSTSKKLNPIANMRMHDLFHILILLASFAHFWFMLKYVLPIN

Sequences:

>Translated_229_residues
MFKKKKKHKSYHASIPKNELFSSISHLIGIILSIIGTTILITLSINSEKYLHAVLFLIYGSSMTLLYTMSTLYHMFTRGS
KIKQLFRKFDHISIFILIAGTYTPPCLILMPNVYGKIILIAVWGFAILGIIFKSIYINSPGWINGCIFILMGWSIIFGIK
LIYEILPIKGFVWLGLGGILYTLGGIVYSTSKKLNPIANMRMHDLFHILILLASFAHFWFMLKYVLPIN
>Mature_229_residues
MFKKKKKHKSYHASIPKNELFSSISHLIGIILSIIGTTILITLSINSEKYLHAVLFLIYGSSMTLLYTMSTLYHMFTRGS
KIKQLFRKFDHISIFILIAGTYTPPCLILMPNVYGKIILIAVWGFAILGIIFKSIYINSPGWINGCIFILMGWSIIFGIK
LIYEILPIKGFVWLGLGGILYTLGGIVYSTSKKLNPIANMRMHDLFHILILLASFAHFWFMLKYVLPIN

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=206, Percent_Identity=31.0679611650485, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 26086; Mature: 26086

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKKKKHKSYHASIPKNELFSSISHLIGIILSIIGTTILITLSINSEKYLHAVLFLIYG
CCCCHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHC
SSMTLLYTMSTLYHMFTRGSKIKQLFRKFDHISIFILIAGTYTPPCLILMPNVYGKIILI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCHHHHHHHH
AVWGFAILGIIFKSIYINSPGWINGCIFILMGWSIIFGIKLIYEILPIKGFVWLGLGGIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YTLGGIVYSTSKKLNPIANMRMHDLFHILILLASFAHFWFMLKYVLPIN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKKKKKHKSYHASIPKNELFSSISHLIGIILSIIGTTILITLSINSEKYLHAVLFLIYG
CCCCHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHC
SSMTLLYTMSTLYHMFTRGSKIKQLFRKFDHISIFILIAGTYTPPCLILMPNVYGKIILI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCHHHHHHHH
AVWGFAILGIIFKSIYINSPGWINGCIFILMGWSIIFGIKLIYEILPIKGFVWLGLGGIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YTLGGIVYSTSKKLNPIANMRMHDLFHILILLASFAHFWFMLKYVLPIN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]