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The map label for this gene is ypjC [H]

Identifier: 187917900

GI number: 187917900

Start: 16151

End: 17116

Strand: Direct

Name: ypjC [H]

Synonym: BH0017

Alternate gene names: 187917900

Gene position: 16151-17116 (Clockwise)

Preceding gene: 187917897

Following gene: 187917909

Centisome position: 1.75

GC content: 30.85

Gene sequence:

>966_bases
ATGAAGAAAAAAAGGAATAAATGGACTAGAATAAAGCAAAAGATTAAATTTTTTGTATTAAAAATACTGAGAAAACAACT
TAAGAATACCCTCAAAGACCCAAAACTAATACTAATTAGCACATTACAAATAACAACTGGTTCGCTTTTAATGGCAATAT
CTACAAACATTTTATATATACCACATGGACTCTTAAGTGGTGGCATTGCGGGGATTGCACTTATGCTACATTACCTCTTA
AGGTTTAACCTAGGACTTACAATATTCATACTAAATATTCCATTATTCATTATTGGAATCAAATTTCTAAATATAACATT
CGTAATTCAAAGCTGGATCGCAATGGCTTTATATTCTCTAATGGTCAACTATTCACAATTCTTGCAATACAAAATGCAAA
TGAATGATATGATACTTGTATCAATTCTTGCAGGTCTCATATCAGGTCTTGGGCTCGGTCTAATATTTAAAGCAAAGGGC
TCCTCAGGCGGTACAGATATCATATCTATGATAATTAAAGAAAAATATTCAATTAGCATTGGAACTACAAATTTCCTCTT
TAACCTCGCAGTACTATTGATTGCAGCGGCTTTTTTCAATATTGAAATTGCTCTTTATACTCTAATTGCTTCATTTGTAA
CAGCTATAATGACAGATAAGACAAGTACAGGATTTGGTAACCAAAAAGCAATCCTTATTATCTCAGATAAAGGAAAAGAA
ATATCTTATTTAATTACCAATAAATTAAAAGTAGCAGCTACACTACTTGATGGAAAAGGCGCTTGGGCTGGAAACGATAA
GACTATAGTTTTTATAGTAGTTCCCACAATGCGTATGTCCAGAATTAAATATATTTCTCAAAAAGTTGACCCTAACTGTT
TTATTACAGTACTTAACACAAATGAAATAACTGGTGGAAAAAAAATTATTGAACCAATTACAAATAAAAACGATATTGCG
ACTTAA

Upstream 100 bases:

>100_bases
AAAAGAAATAATTGCAACAAAATTGAATTGTTTTTTAGTAAAATTAATGTAAAATTCAAGTGAATCAATAATTTCATGCT
GAAGAGTAAGTAACAAAAAA

Downstream 100 bases:

>100_bases
AACTTATCTAAAAAAACAATAAAATCATTAACAAGCAGACCTAATGTCTCTTTATCATAAAAAATCGACAAAAAATCGAT
GAATCTTTGTGGAAATGCTG

Product: hypothetical membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKKKRNKWTRIKQKIKFFVLKILRKQLKNTLKDPKLILISTLQITTGSLLMAISTNILYIPHGLLSGGIAGIALMLHYLL
RFNLGLTIFILNIPLFIIGIKFLNITFVIQSWIAMALYSLMVNYSQFLQYKMQMNDMILVSILAGLISGLGLGLIFKAKG
SSGGTDIISMIIKEKYSISIGTTNFLFNLAVLLIAAAFFNIEIALYTLIASFVTAIMTDKTSTGFGNQKAILIISDKGKE
ISYLITNKLKVAATLLDGKGAWAGNDKTIVFIVVPTMRMSRIKYISQKVDPNCFITVLNTNEITGGKKIIEPITNKNDIA
T

Sequences:

>Translated_321_residues
MKKKRNKWTRIKQKIKFFVLKILRKQLKNTLKDPKLILISTLQITTGSLLMAISTNILYIPHGLLSGGIAGIALMLHYLL
RFNLGLTIFILNIPLFIIGIKFLNITFVIQSWIAMALYSLMVNYSQFLQYKMQMNDMILVSILAGLISGLGLGLIFKAKG
SSGGTDIISMIIKEKYSISIGTTNFLFNLAVLLIAAAFFNIEIALYTLIASFVTAIMTDKTSTGFGNQKAILIISDKGKE
ISYLITNKLKVAATLLDGKGAWAGNDKTIVFIVVPTMRMSRIKYISQKVDPNCFITVLNTNEITGGKKIIEPITNKNDIA
T
>Mature_321_residues
MKKKRNKWTRIKQKIKFFVLKILRKQLKNTLKDPKLILISTLQITTGSLLMAISTNILYIPHGLLSGGIAGIALMLHYLL
RFNLGLTIFILNIPLFIIGIKFLNITFVIQSWIAMALYSLMVNYSQFLQYKMQMNDMILVSILAGLISGLGLGLIFKAKG
SSGGTDIISMIIKEKYSISIGTTNFLFNLAVLLIAAAFFNIEIALYTLIASFVTAIMTDKTSTGFGNQKAILIISDKGKE
ISYLITNKLKVAATLLDGKGAWAGNDKTIVFIVVPTMRMSRIKYISQKVDPNCFITVLNTNEITGGKKIIEPITNKNDIA
T

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 35599; Mature: 35599

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKRNKWTRIKQKIKFFVLKILRKQLKNTLKDPKLILISTLQITTGSLLMAISTNILYI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEE
PHGLLSGGIAGIALMLHYLLRFNLGLTIFILNIPLFIIGIKFLNITFVIQSWIAMALYSL
CCHHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVNYSQFLQYKMQMNDMILVSILAGLISGLGLGLIFKAKGSSGGTDIISMIIKEKYSISI
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCEEEE
GTTNFLFNLAVLLIAAAFFNIEIALYTLIASFVTAIMTDKTSTGFGNQKAILIISDKGKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCE
ISYLITNKLKVAATLLDGKGAWAGNDKTIVFIVVPTMRMSRIKYISQKVDPNCFITVLNT
EEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEC
NEITGGKKIIEPITNKNDIAT
CCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKKRNKWTRIKQKIKFFVLKILRKQLKNTLKDPKLILISTLQITTGSLLMAISTNILYI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEE
PHGLLSGGIAGIALMLHYLLRFNLGLTIFILNIPLFIIGIKFLNITFVIQSWIAMALYSL
CCHHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVNYSQFLQYKMQMNDMILVSILAGLISGLGLGLIFKAKGSSGGTDIISMIIKEKYSISI
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCEEEE
GTTNFLFNLAVLLIAAAFFNIEIALYTLIASFVTAIMTDKTSTGFGNQKAILIISDKGKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCE
ISYLITNKLKVAATLLDGKGAWAGNDKTIVFIVVPTMRMSRIKYISQKVDPNCFITVLNT
EEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEC
NEITGGKKIIEPITNKNDIAT
CCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]