Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187917909

Identifier: 187917909

GI number: 187917909

Start: 25475

End: 26110

Strand: Direct

Name: 187917909

Synonym: BH0027

Alternate gene names: NA

Gene position: 25475-26110 (Clockwise)

Preceding gene: 187917900

Following gene: 187917910

Centisome position: 2.76

GC content: 32.39

Gene sequence:

>636_bases
ATGAAAAAGAATCTTTTAATCGTACTCACCTTACTATTCTTGTTGCATACAAATGTGAAAAGAATTGAAGCATATTCAAT
TGATAGAAAGGGAAATTCTGTTATGGAAGTAGACTTAAGCTTAGGAATCCCCCTTTTTTACAATGATTTATCAAGCGTCT
CCTCTTCAAATCTATACCCGGGAGGAATTGGAGCACTGAAATATAGATATCACATCCTAAGCAACTTAGCTATAGGTCTT
GAGCTTAGATACCTGTTTAATTTTGACATCAATCATTCATTTAATTTATTAAATCCTGATTCTGGAATAGGTAAAACATT
CAGTACAGTGCCTATCACATTCTTAACAACCTATGTATTTGACATAGGAGAGCTCCTTCAAATACCCATATTTTCAAATA
TAGGATTTTCTTTAAGCTCTTATGGGGATAAAAGTGACAGTATCTCAAATTTAAGAACTTTTGATACAATGCCTGTAATA
TCTATTGGTTCTGGAATCTTATGGAATTTCAATTATCAATGGGCTTTAGGAATTACAACTGCATGGTGGACAATGTTTGA
ATTTGGCAATTCGGCTAAAACCGGACATTTTTTACTAATATCACTCTCAGTAATAGTAAATATCAACAAATTGTAG

Upstream 100 bases:

>100_bases
CATAAATAAAGATAGACTCACACAAAAATTTAATTGTAATAAAACCCGTTTTTCAATATAATAACTTTTAAATAAAGAGT
TTCTTAAAATATGGAGAATA

Downstream 100 bases:

>100_bases
GTAAATATGAATAAAAAAGATTTTACAAAATTTATAATGATAATATTAACACTGTCAGTTTTATCATGTTCAAGTGAATC
TATCTTTTCTCAGCTTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKKNLLIVLTLLFLLHTNVKRIEAYSIDRKGNSVMEVDLSLGIPLFYNDLSSVSSSNLYPGGIGALKYRYHILSNLAIGL
ELRYLFNFDINHSFNLLNPDSGIGKTFSTVPITFLTTYVFDIGELLQIPIFSNIGFSLSSYGDKSDSISNLRTFDTMPVI
SIGSGILWNFNYQWALGITTAWWTMFEFGNSAKTGHFLLISLSVIVNINKL

Sequences:

>Translated_211_residues
MKKNLLIVLTLLFLLHTNVKRIEAYSIDRKGNSVMEVDLSLGIPLFYNDLSSVSSSNLYPGGIGALKYRYHILSNLAIGL
ELRYLFNFDINHSFNLLNPDSGIGKTFSTVPITFLTTYVFDIGELLQIPIFSNIGFSLSSYGDKSDSISNLRTFDTMPVI
SIGSGILWNFNYQWALGITTAWWTMFEFGNSAKTGHFLLISLSVIVNINKL
>Mature_211_residues
MKKNLLIVLTLLFLLHTNVKRIEAYSIDRKGNSVMEVDLSLGIPLFYNDLSSVSSSNLYPGGIGALKYRYHILSNLAIGL
ELRYLFNFDINHSFNLLNPDSGIGKTFSTVPITFLTTYVFDIGELLQIPIFSNIGFSLSSYGDKSDSISNLRTFDTMPVI
SIGSGILWNFNYQWALGITTAWWTMFEFGNSAKTGHFLLISLSVIVNINKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23640; Mature: 23640

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLIVLTLLFLLHTNVKRIEAYSIDRKGNSVMEVDLSLGIPLFYNDLSSVSSSNLYP
CCCCHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEEEEECCCCCEECCHHHCCCCCCCC
GGIGALKYRYHILSNLAIGLELRYLFNFDINHSFNLLNPDSGIGKTFSTVPITFLTTYVF
CCCHHHHHHHHHHHHHEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
DIGELLQIPIFSNIGFSLSSYGDKSDSISNLRTFDTMPVISIGSGILWNFNYQWALGITT
HHHHHHCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEEECHH
AWWTMFEFGNSAKTGHFLLISLSVIVNINKL
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECC
>Mature Secondary Structure
MKKNLLIVLTLLFLLHTNVKRIEAYSIDRKGNSVMEVDLSLGIPLFYNDLSSVSSSNLYP
CCCCHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEEEEECCCCCEECCHHHCCCCCCCC
GGIGALKYRYHILSNLAIGLELRYLFNFDINHSFNLLNPDSGIGKTFSTVPITFLTTYVF
CCCHHHHHHHHHHHHHEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
DIGELLQIPIFSNIGFSLSSYGDKSDSISNLRTFDTMPVISIGSGILWNFNYQWALGITT
HHHHHHCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEEECHH
AWWTMFEFGNSAKTGHFLLISLSVIVNINKL
HHHHHHHCCCCCCCCEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]