Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187917896

Identifier: 187917896

GI number: 187917896

Start: 12476

End: 13054

Strand: Direct

Name: 187917896

Synonym: BH0013

Alternate gene names: NA

Gene position: 12476-13054 (Clockwise)

Preceding gene: 187917895

Following gene: 187917897

Centisome position: 1.35

GC content: 23.14

Gene sequence:

>579_bases
ATGAATAAAAGCAAACTGCTTAAAAAATTGATACTTCTCAAAATACTTGAAAATAATATATCGGGAAATATTTATAGCAA
ACAAGAAGAGCTTAAAAAACTCAAAAATAAAATAATAAAATCTAGAAACATAGAAATTCTAAAACATACAGAACAAAAAG
ATATAAAAGAAAATAATAGCCTCACAAAATCAATAGAATATAAAATAAACAAAAATGACAAAAAAGATTTATTAATAGTA
TATATAGACAAAAAATATTTAAATCAAAATACAGAGATAATAGTAAAAAAATGGTGTGAGAGTATTAACATATTTAATTA
TAAAATAATAGACAACTCTAATGCTCTAACCTTAGAGATCAAGAATCAACAACCTAAAGCAATTCTTGCTTGTGAAGAAG
TAGAATTATTCTTAAATCAAAACTTAAGAATTCAAATTGTGAGAGGATTTGAATTAAACTTTAAAGGAATTCCAATAGTA
TTTACATATCTTCCTACAAGTCAAGTAACAAATCCAGAACTCAAGAAAGAAATCTGGCAAGACTTAAAAATAATAAAAGG
CATAATAAAATATGGTTGA

Upstream 100 bases:

>100_bases
GAACCTGTTTACACTTTTAAAAAAATTTTAAACTCAAAAAACAGAAAATTTACAAGAACAACAGCGCCTGCAAAAGCTTT
ATTTTTAGATAAGGTGTTTT

Downstream 100 bases:

>100_bases
TAGTTTGGAAAACAATTTTTACTATGAAATTGCGTTTAATATTCCCATAAATAGACTTTTTTTTTATAAGTATAAATCAA
AATTAAAAACAGGAATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNKSKLLKKLILLKILENNISGNIYSKQEELKKLKNKIIKSRNIEILKHTEQKDIKENNSLTKSIEYKINKNDKKDLLIV
YIDKKYLNQNTEIIVKKWCESINIFNYKIIDNSNALTLEIKNQQPKAILACEEVELFLNQNLRIQIVRGFELNFKGIPIV
FTYLPTSQVTNPELKKEIWQDLKIIKGIIKYG

Sequences:

>Translated_192_residues
MNKSKLLKKLILLKILENNISGNIYSKQEELKKLKNKIIKSRNIEILKHTEQKDIKENNSLTKSIEYKINKNDKKDLLIV
YIDKKYLNQNTEIIVKKWCESINIFNYKIIDNSNALTLEIKNQQPKAILACEEVELFLNQNLRIQIVRGFELNFKGIPIV
FTYLPTSQVTNPELKKEIWQDLKIIKGIIKYG
>Mature_192_residues
MNKSKLLKKLILLKILENNISGNIYSKQEELKKLKNKIIKSRNIEILKHTEQKDIKENNSLTKSIEYKINKNDKKDLLIV
YIDKKYLNQNTEIIVKKWCESINIFNYKIIDNSNALTLEIKNQQPKAILACEEVELFLNQNLRIQIVRGFELNFKGIPIV
FTYLPTSQVTNPELKKEIWQDLKIIKGIIKYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22590; Mature: 22590

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSKLLKKLILLKILENNISGNIYSKQEELKKLKNKIIKSRNIEILKHTEQKDIKENNS
CCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCC
LTKSIEYKINKNDKKDLLIVYIDKKYLNQNTEIIVKKWCESINIFNYKIIDNSNALTLEI
CEEEEEEEECCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEE
KNQQPKAILACEEVELFLNQNLRIQIVRGFELNFKGIPIVFTYLPTSQVTNPELKKEIWQ
CCCCCCEEEEHHHHHHHHCCCCEEEEEECEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
DLKIIKGIIKYG
HHHHHHHHHHCC
>Mature Secondary Structure
MNKSKLLKKLILLKILENNISGNIYSKQEELKKLKNKIIKSRNIEILKHTEQKDIKENNS
CCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCC
LTKSIEYKINKNDKKDLLIVYIDKKYLNQNTEIIVKKWCESINIFNYKIIDNSNALTLEI
CEEEEEEEECCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEE
KNQQPKAILACEEVELFLNQNLRIQIVRGFELNFKGIPIVFTYLPTSQVTNPELKKEIWQ
CCCCCCEEEEHHHHHHHHCCCCEEEEEECEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
DLKIIKGIIKYG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]