Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736595

Identifier: 187736595

GI number: 187736595

Start: 2579834

End: 2580475

Strand: Reverse

Name: 187736595

Synonym: Amuc_2117

Alternate gene names: NA

Gene position: 2580475-2579834 (Counterclockwise)

Preceding gene: 187736596

Following gene: 187736593

Centisome position: 96.86

GC content: 30.06

Gene sequence:

>642_bases
ATGGATGTGCAATCTTTTTTAGAAAACCCTTGGACCTCTGGGATAGGGGGAGGGATTATTAGCGGATTTATAGTATTTTA
TGTAACAAGATGGCTTTTGCAAAGGAAGGATAAGAGGAATTATATCAATTCAGTACATAGTGCTAATAAACAAGTTATTG
ATTTTTTAAAAGCATATGTGGTAGATAAAGGATTGCCGGATTATCAAATAGTTAACGCTATTATTTCTGCTGCAGCCCGT
GAATTTTCTGTGAAAAAGGAGGAATTGTATGATGTGGTTGTGGTCTGTGAAGAATTAATAAAAGAAATAATAGGTAATGT
TTATGTTTCTGGTGATCAAAAGCAGAAATATTTAGAAGATTTAAGTTTGTATATGGAAAAAGTGAAAAAGGCTCGATGTA
GTATAAAATCATTAGATTTAAATGATTTAGAGGATCTATTGGATGAGTCTTTTCATTTGAATGTTAGCCTCATGTTAGGA
GGAGTATCGGCTTTGTTTGGATTTATTATACCATTTTTACCTCGTTTGTTTAGATTTTTTAAAGAATCATACATTTTAAC
AATTACAGTGATTATGATTTGTTTGGTTCTTGTTATTTTTTATTTGATATTTTTAAATAAAGGGAAAAAGCAACATAAAT
AG

Upstream 100 bases:

>100_bases
GGTGGGGAAAGTAATGTATCCTATATATTTTTATACAAAAATTTGGTATTTGGAAAATACTTGTTGACATTTTTTATTAT
CTGACCTTTCCTTGAAAGAT

Downstream 100 bases:

>100_bases
AAAAATATTTTCCATGGATTATCTTATGGAGTTATTTTTTACTTATATATTTTTACTGCAATTACAAATGACGGCAATCT
TGATGCCTTTCATCTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDVQSFLENPWTSGIGGGIISGFIVFYVTRWLLQRKDKRNYINSVHSANKQVIDFLKAYVVDKGLPDYQIVNAIISAAAR
EFSVKKEELYDVVVVCEELIKEIIGNVYVSGDQKQKYLEDLSLYMEKVKKARCSIKSLDLNDLEDLLDESFHLNVSLMLG
GVSALFGFIIPFLPRLFRFFKESYILTITVIMICLVLVIFYLIFLNKGKKQHK

Sequences:

>Translated_213_residues
MDVQSFLENPWTSGIGGGIISGFIVFYVTRWLLQRKDKRNYINSVHSANKQVIDFLKAYVVDKGLPDYQIVNAIISAAAR
EFSVKKEELYDVVVVCEELIKEIIGNVYVSGDQKQKYLEDLSLYMEKVKKARCSIKSLDLNDLEDLLDESFHLNVSLMLG
GVSALFGFIIPFLPRLFRFFKESYILTITVIMICLVLVIFYLIFLNKGKKQHK
>Mature_213_residues
MDVQSFLENPWTSGIGGGIISGFIVFYVTRWLLQRKDKRNYINSVHSANKQVIDFLKAYVVDKGLPDYQIVNAIISAAAR
EFSVKKEELYDVVVVCEELIKEIIGNVYVSGDQKQKYLEDLSLYMEKVKKARCSIKSLDLNDLEDLLDESFHLNVSLMLG
GVSALFGFIIPFLPRLFRFFKESYILTITVIMICLVLVIFYLIFLNKGKKQHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24464; Mature: 24464

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQSFLENPWTSGIGGGIISGFIVFYVTRWLLQRKDKRNYINSVHSANKQVIDFLKAYV
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKGLPDYQIVNAIISAAAREFSVKKEELYDVVVVCEELIKEIIGNVYVSGDQKQKYLED
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LSLYMEKVKKARCSIKSLDLNDLEDLLDESFHLNVSLMLGGVSALFGFIIPFLPRLFRFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KESYILTITVIMICLVLVIFYLIFLNKGKKQHK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDVQSFLENPWTSGIGGGIISGFIVFYVTRWLLQRKDKRNYINSVHSANKQVIDFLKAYV
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKGLPDYQIVNAIISAAAREFSVKKEELYDVVVVCEELIKEIIGNVYVSGDQKQKYLED
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LSLYMEKVKKARCSIKSLDLNDLEDLLDESFHLNVSLMLGGVSALFGFIIPFLPRLFRFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KESYILTITVIMICLVLVIFYLIFLNKGKKQHK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA