| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187736592
Identifier: 187736592
GI number: 187736592
Start: 2576213
End: 2576992
Strand: Reverse
Name: 187736592
Synonym: Amuc_2114
Alternate gene names: NA
Gene position: 2576992-2576213 (Counterclockwise)
Preceding gene: 187736593
Following gene: 187736588
Centisome position: 96.73
GC content: 60.26
Gene sequence:
>780_bases ATGCCTGACGAGGGCCCTCTGGAACATTACCTGACTGTTTCCCATGAGCCGGAACCGGACATTCCGGAACCGGCTCCGGA ACGCAGTCCTGGACCGTGGCGAGAAAGGGGCATCATGCTGGGCCTGGGCTTTCTGCTGGGGTGCATCGGGGCTTATGCGC TGGTTTACTCGGAAATGTCCGGCGGCATGCGGTCGCTGAAGCAGTCGCTTTCAGAAGAACGCGACTTGAACGCGTCCCTG CAGAAAGAACGTGCCCATCTGCGGGAAACGTTGGAACAGGCACGCATGGACGCTCTGCTGGAGGAACGCTCCCCCCTTTC CGTGACGGTCGGCGGTATTCCCAAGACAAGCCGCAAGCCCGTTCCCCAGCCTCCGCCGCTTACGCCATTATCCTCCGGAG GACTGGCATCCCCGTCTTCCGCGCCGGTTCCCGGTTCTCTGGATGACCGTCTGGTCAATCCGGGGCCGGAGGACTGGAAG GAGCGTTACCAGTACGCCGCTTTGAAATATAACCAGGTGGTGGAGGATTACAACAGGCTGAAGAAACTTTACATGAACCT GGTGGGTCGGAGCGGTGCAGCCGGCGGGCTGGTGACGGGGGCCCAGTTTTACAAAGCTCTGCGGAAAGATACCCGTGCGG AGGCGCGCAAGCTGGATGAACGCTACATGAAGGGAGGGATGCGGGGCAGCGAGCTTCGGGAACTGGAACGCAGCCGGGAC GAGATGAGGCACCGGGACTGGTGGTTGAAAAAAATGGCACGCCAGTTCCAAATTGATTAG
Upstream 100 bases:
>100_bases CCGGATTCCGGAGGCGCTTGTGCCGTATTTCGGCGCGGACTGCATCCGTCCTGAACAGGCTTGAACCTGCGTTTTTCCCG TCCCAACCCTGAATCAGCCC
Downstream 100 bases:
>100_bases ATACGTGGGTGTTGCCGGCGTGAAGTATTGTTTTTGTGAAGCGCCCCTTGCTGAAATTCCTGTTGCATGGAATCTTTTTG CAGAGAGCCGTACGGTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPDEGPLEHYLTVSHEPEPDIPEPAPERSPGPWRERGIMLGLGFLLGCIGAYALVYSEMSGGMRSLKQSLSEERDLNASL QKERAHLRETLEQARMDALLEERSPLSVTVGGIPKTSRKPVPQPPPLTPLSSGGLASPSSAPVPGSLDDRLVNPGPEDWK ERYQYAALKYNQVVEDYNRLKKLYMNLVGRSGAAGGLVTGAQFYKALRKDTRAEARKLDERYMKGGMRGSELRELERSRD EMRHRDWWLKKMARQFQID
Sequences:
>Translated_259_residues MPDEGPLEHYLTVSHEPEPDIPEPAPERSPGPWRERGIMLGLGFLLGCIGAYALVYSEMSGGMRSLKQSLSEERDLNASL QKERAHLRETLEQARMDALLEERSPLSVTVGGIPKTSRKPVPQPPPLTPLSSGGLASPSSAPVPGSLDDRLVNPGPEDWK ERYQYAALKYNQVVEDYNRLKKLYMNLVGRSGAAGGLVTGAQFYKALRKDTRAEARKLDERYMKGGMRGSELRELERSRD EMRHRDWWLKKMARQFQID >Mature_258_residues PDEGPLEHYLTVSHEPEPDIPEPAPERSPGPWRERGIMLGLGFLLGCIGAYALVYSEMSGGMRSLKQSLSEERDLNASLQ KERAHLRETLEQARMDALLEERSPLSVTVGGIPKTSRKPVPQPPPLTPLSSGGLASPSSAPVPGSLDDRLVNPGPEDWKE RYQYAALKYNQVVEDYNRLKKLYMNLVGRSGAAGGLVTGAQFYKALRKDTRAEARKLDERYMKGGMRGSELRELERSRDE MRHRDWWLKKMARQFQID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29160; Mature: 29028
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEGPLEHYLTVSHEPEPDIPEPAPERSPGPWRERGIMLGLGFLLGCIGAYALVYSEMS CCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMRSLKQSLSEERDLNASLQKERAHLRETLEQARMDALLEERSPLSVTVGGIPKTSRKP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC VPQPPPLTPLSSGGLASPSSAPVPGSLDDRLVNPGPEDWKERYQYAALKYNQVVEDYNRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KKLYMNLVGRSGAAGGLVTGAQFYKALRKDTRAEARKLDERYMKGGMRGSELRELERSRD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EMRHRDWWLKKMARQFQID HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDEGPLEHYLTVSHEPEPDIPEPAPERSPGPWRERGIMLGLGFLLGCIGAYALVYSEMS CCCCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMRSLKQSLSEERDLNASLQKERAHLRETLEQARMDALLEERSPLSVTVGGIPKTSRKP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC VPQPPPLTPLSSGGLASPSSAPVPGSLDDRLVNPGPEDWKERYQYAALKYNQVVEDYNRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KKLYMNLVGRSGAAGGLVTGAQFYKALRKDTRAEARKLDERYMKGGMRGSELRELERSRD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EMRHRDWWLKKMARQFQID HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA