Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735009

Identifier: 187735009

GI number: 187735009

Start: 592354

End: 593475

Strand: Reverse

Name: 187735009

Synonym: Amuc_0502

Alternate gene names: NA

Gene position: 593475-592354 (Counterclockwise)

Preceding gene: 187735011

Following gene: 187735008

Centisome position: 22.28

GC content: 55.17

Gene sequence:

>1122_bases
ATGAGTTCACTTTCCGATACCAGGCCGCAGAGAATTGCGGCCATTGACGCCCTGCGGGGATTTGACATGTTTTTCCTGAC
CGGGGGCCTGGCTCTGGTTGTGGCCGGCATCAATCTTTTTTACGACCGGAGCCCCGAGTGGCTGGTGAAGCACAGCACGC
ACGTGGCTTGGGAGGGATTCGCCGCCTGGGATCTGGTGATGCCCCTCTTTTTGTTCATTGTGGGAACGGCCATGCCGTTT
TCCTTTTCCAAACGCATCGGTTCGGAACCTCTGTGGAAGATTTACCTGAAGGTTGCCAGGCGGGTAGTGGTGCTTTTTTT
GCTGGGCATGGTGGTGCAGGGCAATCTGCTGAGTTTTGAACCGTCCAGGATGTCCCTGTACTGCAATACGCTCCAGGCCA
TCGCCTCCGGCTACCTGATTGCGGCCATTTGCCTTCTTCATCTGTCCATCCGGTGGCAGGTAGCGGCAACGGGGGGGCTG
CTGGCTGTGTACTGGCTGGTCATGAAGTTTGTTTCCTTTTCTGACCCCGCGGTGGGTTCCTGTGCGGCAGGAATGCTTGA
ACCGGGGAGGAATCTGGCCCTGCTGCTGGATAAATACCTGATGGGAAACTGGCAGGATGGAACGAATTATGCGTGGATTC
TGGCGCAGTTCGGTTTTGGCGCCATGACCATGCTCGGTCTGCTGGGCGGCCAGATTCTGAAGCGGGTGCAGGGGCACGGG
AAAAAGCTGGCGTGGCTGTTATGTGCGGGCGCGGGCTGCCTGGCGCTGGGATATGCCTGGAGCCTGGATTTTCCGATGAT
CAAGCGTTTGTTCACCAGTTCCATGGTATTGTGGGCGGCGGGATGGTGCTATTTTCTGCTGTTCCTGTTCTATCTGCTGA
CGGATGTGCTGAAATTGAACTGGTTGACATTCTTTTTCTCCGTAATAGGGAGCAATGCCATTTTCGTGTACATGTGGGTA
TCTCTGTGCCCCCCTACGGGCAATTTCTCCCGGGTATTGTTTGCCGGGTTTAGCGAGTGCTTCGGGGATGCGGACAGGTT
TGTCTTTTACCTGTGCAATTACGCCCTGATTTGGGGCGTGTTGTATTACATGTACAAAAACCGGACCTTCATCAAGGTCT
AG

Upstream 100 bases:

>100_bases
ACAGGTTTTTCCGGAAACAGCCGTTTTTCTTTGCGGAGCCTTAGAAAAAGAAAGTCTTTGGAAAGGTTGGCGGACGTGGT
GCCGTAGTTGGAATGTTGCC

Downstream 100 bases:

>100_bases
GCTTGTTTTCAGCCCTTCGTTCATAGTAGGGTCTCCCCGTGCGGAAGGCGGGGAACGCCTTCCGCACGGGATCGGCATGC
CCGCGCCGGGCGTCCGTCAT

Product: transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSSLSDTRPQRIAAIDALRGFDMFFLTGGLALVVAGINLFYDRSPEWLVKHSTHVAWEGFAAWDLVMPLFLFIVGTAMPF
SFSKRIGSEPLWKIYLKVARRVVVLFLLGMVVQGNLLSFEPSRMSLYCNTLQAIASGYLIAAICLLHLSIRWQVAATGGL
LAVYWLVMKFVSFSDPAVGSCAAGMLEPGRNLALLLDKYLMGNWQDGTNYAWILAQFGFGAMTMLGLLGGQILKRVQGHG
KKLAWLLCAGAGCLALGYAWSLDFPMIKRLFTSSMVLWAAGWCYFLLFLFYLLTDVLKLNWLTFFFSVIGSNAIFVYMWV
SLCPPTGNFSRVLFAGFSECFGDADRFVFYLCNYALIWGVLYYMYKNRTFIKV

Sequences:

>Translated_373_residues
MSSLSDTRPQRIAAIDALRGFDMFFLTGGLALVVAGINLFYDRSPEWLVKHSTHVAWEGFAAWDLVMPLFLFIVGTAMPF
SFSKRIGSEPLWKIYLKVARRVVVLFLLGMVVQGNLLSFEPSRMSLYCNTLQAIASGYLIAAICLLHLSIRWQVAATGGL
LAVYWLVMKFVSFSDPAVGSCAAGMLEPGRNLALLLDKYLMGNWQDGTNYAWILAQFGFGAMTMLGLLGGQILKRVQGHG
KKLAWLLCAGAGCLALGYAWSLDFPMIKRLFTSSMVLWAAGWCYFLLFLFYLLTDVLKLNWLTFFFSVIGSNAIFVYMWV
SLCPPTGNFSRVLFAGFSECFGDADRFVFYLCNYALIWGVLYYMYKNRTFIKV
>Mature_372_residues
SSLSDTRPQRIAAIDALRGFDMFFLTGGLALVVAGINLFYDRSPEWLVKHSTHVAWEGFAAWDLVMPLFLFIVGTAMPFS
FSKRIGSEPLWKIYLKVARRVVVLFLLGMVVQGNLLSFEPSRMSLYCNTLQAIASGYLIAAICLLHLSIRWQVAATGGLL
AVYWLVMKFVSFSDPAVGSCAAGMLEPGRNLALLLDKYLMGNWQDGTNYAWILAQFGFGAMTMLGLLGGQILKRVQGHGK
KLAWLLCAGAGCLALGYAWSLDFPMIKRLFTSSMVLWAAGWCYFLLFLFYLLTDVLKLNWLTFFFSVIGSNAIFVYMWVS
LCPPTGNFSRVLFAGFSECFGDADRFVFYLCNYALIWGVLYYMYKNRTFIKV

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41881; Mature: 41750

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSDTRPQRIAAIDALRGFDMFFLTGGLALVVAGINLFYDRSPEWLVKHSTHVAWEGF
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCH
AAWDLVMPLFLFIVGTAMPFSFSKRIGSEPLWKIYLKVARRVVVLFLLGMVVQGNLLSFE
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PSRMSLYCNTLQAIASGYLIAAICLLHLSIRWQVAATGGLLAVYWLVMKFVSFSDPAVGS
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCHH
CAAGMLEPGRNLALLLDKYLMGNWQDGTNYAWILAQFGFGAMTMLGLLGGQILKRVQGHG
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCC
KKLAWLLCAGAGCLALGYAWSLDFPMIKRLFTSSMVLWAAGWCYFLLFLFYLLTDVLKLN
CCEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLTFFFSVIGSNAIFVYMWVSLCPPTGNFSRVLFAGFSECFGDADRFVFYLCNYALIWGV
HHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LYYMYKNRTFIKV
HHHHHCCCEEEEC
>Mature Secondary Structure 
SSLSDTRPQRIAAIDALRGFDMFFLTGGLALVVAGINLFYDRSPEWLVKHSTHVAWEGF
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCH
AAWDLVMPLFLFIVGTAMPFSFSKRIGSEPLWKIYLKVARRVVVLFLLGMVVQGNLLSFE
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PSRMSLYCNTLQAIASGYLIAAICLLHLSIRWQVAATGGLLAVYWLVMKFVSFSDPAVGS
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCHH
CAAGMLEPGRNLALLLDKYLMGNWQDGTNYAWILAQFGFGAMTMLGLLGGQILKRVQGHG
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHCCC
KKLAWLLCAGAGCLALGYAWSLDFPMIKRLFTSSMVLWAAGWCYFLLFLFYLLTDVLKLN
CCEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLTFFFSVIGSNAIFVYMWVSLCPPTGNFSRVLFAGFSECFGDADRFVFYLCNYALIWGV
HHHHHHHHHCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LYYMYKNRTFIKV
HHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA