| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735011
Identifier: 187735011
GI number: 187735011
Start: 594247
End: 594810
Strand: Reverse
Name: 187735011
Synonym: Amuc_0504
Alternate gene names: NA
Gene position: 594810-594247 (Counterclockwise)
Preceding gene: 187735012
Following gene: 187735009
Centisome position: 22.33
GC content: 56.21
Gene sequence:
>564_bases ATGATGGAAGAAGATTGGAACGATACGTTTTACGACCTTTTCCGCGAAGCGGTGGGGCGCTACCATGAAGGCCACAGGAA TGTGGACGGTTTCTTTACGGACCAGGAAATTATCTTTCTGTCTTCCATCGGCTGCCGCACTCGGGAATTGTTTGATTTTG TAGAAACCTATGCCCGTACGGGAGAACCTTCCCCCACCACGGTTCTGCTGATGGCTGCGGCGCGCCGGGACTTCTTCCTG ACCGTCCAGCACGGGCAGTTTTACCAGGGGAAACCTGTGATCGGGTATGATTTGCCGGGGTTCGGCGACGAACTCTGCGG TCTCCCCTACCTTCCGCGCCTGATTGCCAAGGCGCGGGCCAAGCTCGTCGGTTCCATGGGGGATGACATCATTTACTGCT GTGAGAATGACCGCCGTTTCTTCCGGGATCACGGAAATATTCATCCCGCCGACTTCCTGCGGGTGGTCTGGGCAGCCGGA GACAGCGACCCGAAGGTGTACGATTACGTACGCCAGCGCACCTTGAGTGTTTCCTCTGCTGTTCCGGATAATGAGCAGAC GTAA
Upstream 100 bases:
>100_bases GTTCGGAAATGTCCCGCGAGGAACAGGCCCGCTTTGAAGCCAATCTGACCAAGCAGATCATGATGCTTAACTTCAAGCGC AAACATAAATCGCCGGGCCG
Downstream 100 bases:
>100_bases AAAATGGAAATGCCCGGAATGGGATGATCGTTGATGCTGGAGAATAGCCGGAAACGGCTCGTTTTTTCAGCTTTTGTGGA GATTATTCTTCATAAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MMEEDWNDTFYDLFREAVGRYHEGHRNVDGFFTDQEIIFLSSIGCRTRELFDFVETYARTGEPSPTTVLLMAAARRDFFL TVQHGQFYQGKPVIGYDLPGFGDELCGLPYLPRLIAKARAKLVGSMGDDIIYCCENDRRFFRDHGNIHPADFLRVVWAAG DSDPKVYDYVRQRTLSVSSAVPDNEQT
Sequences:
>Translated_187_residues MMEEDWNDTFYDLFREAVGRYHEGHRNVDGFFTDQEIIFLSSIGCRTRELFDFVETYARTGEPSPTTVLLMAAARRDFFL TVQHGQFYQGKPVIGYDLPGFGDELCGLPYLPRLIAKARAKLVGSMGDDIIYCCENDRRFFRDHGNIHPADFLRVVWAAG DSDPKVYDYVRQRTLSVSSAVPDNEQT >Mature_187_residues MMEEDWNDTFYDLFREAVGRYHEGHRNVDGFFTDQEIIFLSSIGCRTRELFDFVETYARTGEPSPTTVLLMAAARRDFFL TVQHGQFYQGKPVIGYDLPGFGDELCGLPYLPRLIAKARAKLVGSMGDDIIYCCENDRRFFRDHGNIHPADFLRVVWAAG DSDPKVYDYVRQRTLSVSSAVPDNEQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21454; Mature: 21454
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEEDWNDTFYDLFREAVGRYHEGHRNVDGFFTDQEIIFLSSIGCRTRELFDFVETYART CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHC GEPSPTTVLLMAAARRDFFLTVQHGQFYQGKPVIGYDLPGFGDELCGLPYLPRLIAKARA CCCCCCEEEEEEECCCCEEEEEECCCEECCCCEEEECCCCCCHHHCCCCHHHHHHHHHHH KLVGSMGDDIIYCCENDRRFFRDHGNIHPADFLRVVWAAGDSDPKVYDYVRQRTLSVSSA HHHHCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC VPDNEQT CCCCCCC >Mature Secondary Structure MMEEDWNDTFYDLFREAVGRYHEGHRNVDGFFTDQEIIFLSSIGCRTRELFDFVETYART CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHC GEPSPTTVLLMAAARRDFFLTVQHGQFYQGKPVIGYDLPGFGDELCGLPYLPRLIAKARA CCCCCCEEEEEEECCCCEEEEEECCCEECCCCEEEECCCCCCHHHCCCCHHHHHHHHHHH KLVGSMGDDIIYCCENDRRFFRDHGNIHPADFLRVVWAAGDSDPKVYDYVRQRTLSVSSA HHHHCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC VPDNEQT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA