Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734986

Identifier: 187734986

GI number: 187734986

Start: 567156

End: 568616

Strand: Reverse

Name: 187734986

Synonym: Amuc_0479

Alternate gene names: NA

Gene position: 568616-567156 (Counterclockwise)

Preceding gene: 187734987

Following gene: 187734985

Centisome position: 21.34

GC content: 47.71

Gene sequence:

>1461_bases
ATGCAATCCGCTATGTTGCCTTGCACTATGTGCAGGGGACAAAAGAGGGCGGCGGAAGGCAATGACGGGGGCATCAAATA
TTGGTGGATTTTACCTTTTTTGTCTTTCTTTTTTTCCCTGAATAACCAAAGTTTTTGGATTGATGAATGTTGTACTGCAT
TGTGCGCCATGCAGCAGGGAATGGAGGGATGTTGGAAGAAGATTTGTGAAATTGGCGGTAGCGATGCTCAAATGGCCTTT
TATTACTACCTTTTATTTTTGTGGCATCATCTGACGGGTGCGGAGTCTGAATGGATGCTGAGGTTATTTAATATATTCTG
GGTATTTTTATCATCCTGGTTTTTCAGAAAGGAACCAAAGGCGCTGGTGATTCTTTTGATTTCACCGTTTTTTGTTTATT
ATTCTAACGAGTTGCGGCCCTATATGTTGCAGATAGCGGCCTCTTGCGCTGTCTCCATGTTGTTTTGGCAGGTTAGCCGG
GGAGAACCGGTAAAATTCCATGTTTTTTTTGGTTCTCTGTTTTTTTTATGTCTTACAAGCCTGACAGGGGTTGTATGGGC
GCTCGGTTTTGCCGCGGCATTCATGGTCATGGCATTCCGGCAGTTTGGAGGGCGGAGGTTTCGGCGAGCCCTGCTCTGGT
GGATTTTTCCATTTTCCGGGTTGGGAGCATATTATCTTTACACTCTTTTCTTGGGCGCCCGTGCGGTTTCCATATCTTCC
TCCTGGATAGTCAATGCATGCGCTTCCATGTACGAGTTATCGGGATTGGCCGGCATGGGGCCTTCCCGTCTAGAATTGAG
GATGTGCATGACTCCTGATGCTTTATGGAATATGAACGGATTGGGGGCAGGGATGATCTCCGGCGCCATTCTTCTGGCCG
GTTCTGCCTGCGGCATCATTTTGTGGAATAAGCGGGCTGAGAGGCCCTTGGTTCCTGCTTTGCTGGTGTTGATATTGCTT
CCAGGGGCCGTATTCCTTTATGGAACGGAAATGATGGATTTCCGTTTTTCCGGACGGCATTGCGCGCCGTTATTGCCTGT
ATTGTGTCTGGCCTGGTCCCTGGTGGCGTCATGGGATTGGTCGTTCCCCAGGATTGCCCAAACTATCCTGTTCCTATTAA
TGATGATTGTTTGGGCGGTGAGCGATATTCGTATTCGTTGCAATGATTTGTATGGCCGTGAAGATTTCCGCTCTGCGGTA
TCTTATTGCAAATTATTGCAGAGCAGTCATGTTGACATTTTACTTTTATGCAATGGGGCCGGAAAGGAGTTTTATGGATG
GATTCCCGGCCCGTTAAAGGACAAATGGTCTGATTATAAGGTGATCGTAGTTTCCCGGCCATCCGATTATGCTGCTTTTC
TCCAGCCCATAGAGTCTTCCGGCAAGTATGAACGTTCCGAATTATGCCGGGGGTTTGTCATCTATCGGCGGGGTGGAATC
TCCCAACGAGAGGGGTATTGA

Upstream 100 bases:

>100_bases
GTTGCAGAGATAAGAAGAAAAAACAAATCTATTTTCATATTTATCTATTGATATTCATATGGATATGTGATTTCTTCCTG
TAAAAAAGCAGGCGGCGGAT

Downstream 100 bases:

>100_bases
TGTTTTTGCTGTTGTTTCAACATTTTGAGAAGAGACAGTGTCATTATAGAAATGATGGATATTTCTTCCCGCCTGGTCAA
AAGATGCAGGAAATTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MQSAMLPCTMCRGQKRAAEGNDGGIKYWWILPFLSFFFSLNNQSFWIDECCTALCAMQQGMEGCWKKICEIGGSDAQMAF
YYYLLFLWHHLTGAESEWMLRLFNIFWVFLSSWFFRKEPKALVILLISPFFVYYSNELRPYMLQIAASCAVSMLFWQVSR
GEPVKFHVFFGSLFFLCLTSLTGVVWALGFAAAFMVMAFRQFGGRRFRRALLWWIFPFSGLGAYYLYTLFLGARAVSISS
SWIVNACASMYELSGLAGMGPSRLELRMCMTPDALWNMNGLGAGMISGAILLAGSACGIILWNKRAERPLVPALLVLILL
PGAVFLYGTEMMDFRFSGRHCAPLLPVLCLAWSLVASWDWSFPRIAQTILFLLMMIVWAVSDIRIRCNDLYGREDFRSAV
SYCKLLQSSHVDILLLCNGAGKEFYGWIPGPLKDKWSDYKVIVVSRPSDYAAFLQPIESSGKYERSELCRGFVIYRRGGI
SQREGY

Sequences:

>Translated_486_residues
MQSAMLPCTMCRGQKRAAEGNDGGIKYWWILPFLSFFFSLNNQSFWIDECCTALCAMQQGMEGCWKKICEIGGSDAQMAF
YYYLLFLWHHLTGAESEWMLRLFNIFWVFLSSWFFRKEPKALVILLISPFFVYYSNELRPYMLQIAASCAVSMLFWQVSR
GEPVKFHVFFGSLFFLCLTSLTGVVWALGFAAAFMVMAFRQFGGRRFRRALLWWIFPFSGLGAYYLYTLFLGARAVSISS
SWIVNACASMYELSGLAGMGPSRLELRMCMTPDALWNMNGLGAGMISGAILLAGSACGIILWNKRAERPLVPALLVLILL
PGAVFLYGTEMMDFRFSGRHCAPLLPVLCLAWSLVASWDWSFPRIAQTILFLLMMIVWAVSDIRIRCNDLYGREDFRSAV
SYCKLLQSSHVDILLLCNGAGKEFYGWIPGPLKDKWSDYKVIVVSRPSDYAAFLQPIESSGKYERSELCRGFVIYRRGGI
SQREGY
>Mature_486_residues
MQSAMLPCTMCRGQKRAAEGNDGGIKYWWILPFLSFFFSLNNQSFWIDECCTALCAMQQGMEGCWKKICEIGGSDAQMAF
YYYLLFLWHHLTGAESEWMLRLFNIFWVFLSSWFFRKEPKALVILLISPFFVYYSNELRPYMLQIAASCAVSMLFWQVSR
GEPVKFHVFFGSLFFLCLTSLTGVVWALGFAAAFMVMAFRQFGGRRFRRALLWWIFPFSGLGAYYLYTLFLGARAVSISS
SWIVNACASMYELSGLAGMGPSRLELRMCMTPDALWNMNGLGAGMISGAILLAGSACGIILWNKRAERPLVPALLVLILL
PGAVFLYGTEMMDFRFSGRHCAPLLPVLCLAWSLVASWDWSFPRIAQTILFLLMMIVWAVSDIRIRCNDLYGREDFRSAV
SYCKLLQSSHVDILLLCNGAGKEFYGWIPGPLKDKWSDYKVIVVSRPSDYAAFLQPIESSGKYERSELCRGFVIYRRGGI
SQREGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55314; Mature: 55314

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSAMLPCTMCRGQKRAAEGNDGGIKYWWILPFLSFFFSLNNQSFWIDECCTALCAMQQG
CCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
MEGCWKKICEIGGSDAQMAFYYYLLFLWHHLTGAESEWMLRLFNIFWVFLSSWFFRKEPK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ALVILLISPFFVYYSNELRPYMLQIAASCAVSMLFWQVSRGEPVKFHVFFGSLFFLCLTS
EEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
LTGVVWALGFAAAFMVMAFRQFGGRRFRRALLWWIFPFSGLGAYYLYTLFLGARAVSISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCH
SWIVNACASMYELSGLAGMGPSRLELRMCMTPDALWNMNGLGAGMISGAILLAGSACGII
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCCEEE
LWNKRAERPLVPALLVLILLPGAVFLYGTEMMDFRFSGRHCAPLLPVLCLAWSLVASWDW
EECCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCC
SFPRIAQTILFLLMMIVWAVSDIRIRCNDLYGREDFRSAVSYCKLLQSSHVDILLLCNGA
CCHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCC
GKEFYGWIPGPLKDKWSDYKVIVVSRPSDYAAFLQPIESSGKYERSELCRGFVIYRRGGI
CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCC
SQREGY
CCCCCC
>Mature Secondary Structure
MQSAMLPCTMCRGQKRAAEGNDGGIKYWWILPFLSFFFSLNNQSFWIDECCTALCAMQQG
CCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
MEGCWKKICEIGGSDAQMAFYYYLLFLWHHLTGAESEWMLRLFNIFWVFLSSWFFRKEPK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ALVILLISPFFVYYSNELRPYMLQIAASCAVSMLFWQVSRGEPVKFHVFFGSLFFLCLTS
EEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
LTGVVWALGFAAAFMVMAFRQFGGRRFRRALLWWIFPFSGLGAYYLYTLFLGARAVSISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCH
SWIVNACASMYELSGLAGMGPSRLELRMCMTPDALWNMNGLGAGMISGAILLAGSACGII
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCCEEE
LWNKRAERPLVPALLVLILLPGAVFLYGTEMMDFRFSGRHCAPLLPVLCLAWSLVASWDW
EECCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCC
SFPRIAQTILFLLMMIVWAVSDIRIRCNDLYGREDFRSAVSYCKLLQSSHVDILLLCNGA
CCHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCC
GKEFYGWIPGPLKDKWSDYKVIVVSRPSDYAAFLQPIESSGKYERSELCRGFVIYRRGGI
CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCC
SQREGY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA