| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is thiE [H]
Identifier: 187734884
GI number: 187734884
Start: 450548
End: 451192
Strand: Direct
Name: thiE [H]
Synonym: Amuc_0376
Alternate gene names: 187734884
Gene position: 450548-451192 (Clockwise)
Preceding gene: 187734877
Following gene: 187734897
Centisome position: 16.91
GC content: 53.18
Gene sequence:
>645_bases ATGAACAGGAAGGAATGCCTCTCATCCTGCCGTCTGTACGGTATTGTAGATATGGGATATACAGCTGAACATCAACTACT CCCTGTAACAGAAAAACTATTGGCAGGCGGCCTGCGCATTCTCCAGCTAAGGGCAAAAAACCATAACCCGGAACACATTG AAAATATGGGGCTCCAGCTTGCCCCCCTGTGCCGTAAATACGGCTGTCTTTTCATCATCAACGATTATCCTGAAATTGCC CTGAACATCGGCGCAGACGGCGTCCATCTGGGACAGGATGACGGAGACTTGGCATCCGTAAGGGGGCTGCTGGGAAAGGA TGCCGTTATAGGACGGTCCACGCATAGTCCTGAACAGGCCTTGGGTGCATGTGGAGAGCAGGCGGACTATATCGGGTTTG GGCCCTTGTTCCCCACGGGTACCAAACCGGGAAGACAGGCCATTGGCCTGGAAGACATCGCAAGCGTACAGCAACAGCTA CCGGAAAATTTCCCTGTCTTCTGTATCGGCGGCATCAATGGGAACACACTGCCCTCCGTACTGGAGGCGGGGGCAAACAG GGTAGTCATCGTTTCCTGGCTGCTTACACACCCCGACATCACGGGAACAGTCAGAACTCTCAGAAAAGAACTGGGAGAAG CGTAA
Upstream 100 bases:
>100_bases AGGCGGGTGACACAATGCGGGGAGTGTATCACACCCTCTTTTAGGGTCAAGAATGGGAAGCGTCTTGCCGGGATGATTTT ATCCGGTACAATTCCTTGCC
Downstream 100 bases:
>100_bases CGAAAAACGCACACCCCCAGCCATGTTATCCCTGCCTTTCCTCTTCCTCCGGAGACAGAGCCGGACGGGAGATCAGAAAA ACGGCGGTATTCACAATCAT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNRKECLSSCRLYGIVDMGYTAEHQLLPVTEKLLAGGLRILQLRAKNHNPEHIENMGLQLAPLCRKYGCLFIINDYPEIA LNIGADGVHLGQDDGDLASVRGLLGKDAVIGRSTHSPEQALGACGEQADYIGFGPLFPTGTKPGRQAIGLEDIASVQQQL PENFPVFCIGGINGNTLPSVLEAGANRVVIVSWLLTHPDITGTVRTLRKELGEA
Sequences:
>Translated_214_residues MNRKECLSSCRLYGIVDMGYTAEHQLLPVTEKLLAGGLRILQLRAKNHNPEHIENMGLQLAPLCRKYGCLFIINDYPEIA LNIGADGVHLGQDDGDLASVRGLLGKDAVIGRSTHSPEQALGACGEQADYIGFGPLFPTGTKPGRQAIGLEDIASVQQQL PENFPVFCIGGINGNTLPSVLEAGANRVVIVSWLLTHPDITGTVRTLRKELGEA >Mature_214_residues MNRKECLSSCRLYGIVDMGYTAEHQLLPVTEKLLAGGLRILQLRAKNHNPEHIENMGLQLAPLCRKYGCLFIINDYPEIA LNIGADGVHLGQDDGDLASVRGLLGKDAVIGRSTHSPEQALGACGEQADYIGFGPLFPTGTKPGRQAIGLEDIASVQQQL PENFPVFCIGGINGNTLPSVLEAGANRVVIVSWLLTHPDITGTVRTLRKELGEA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=163, Percent_Identity=34.9693251533742, Blast_Score=91, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6325042, Length=192, Percent_Identity=31.7708333333333, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23008; Mature: 23008
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKECLSSCRLYGIVDMGYTAEHQLLPVTEKLLAGGLRILQLRAKNHNPEHIENMGLQL CCHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCH APLCRKYGCLFIINDYPEIALNIGADGVHLGQDDGDLASVRGLLGKDAVIGRSTHSPEQA HHHHHHCCEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHCCCCEECCCCCCHHHH LGACGEQADYIGFGPLFPTGTKPGRQAIGLEDIASVQQQLPENFPVFCIGGINGNTLPSV HHCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH LEAGANRVVIVSWLLTHPDITGTVRTLRKELGEA HHCCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNRKECLSSCRLYGIVDMGYTAEHQLLPVTEKLLAGGLRILQLRAKNHNPEHIENMGLQL CCHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCH APLCRKYGCLFIINDYPEIALNIGADGVHLGQDDGDLASVRGLLGKDAVIGRSTHSPEQA HHHHHHCCEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHHHCCCCEECCCCCCHHHH LGACGEQADYIGFGPLFPTGTKPGRQAIGLEDIASVQQQLPENFPVFCIGGINGNTLPSV HHCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH LEAGANRVVIVSWLLTHPDITGTVRTLRKELGEA HHCCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA