Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734862

Identifier: 187734862

GI number: 187734862

Start: 417915

End: 419204

Strand: Reverse

Name: 187734862

Synonym: Amuc_0354

Alternate gene names: NA

Gene position: 419204-417915 (Counterclockwise)

Preceding gene: 187734865

Following gene: 187734861

Centisome position: 15.74

GC content: 54.57

Gene sequence:

>1290_bases
ATGTTCCCGTTTCCTCCTGTTGTCCGTTCTTTCCTGTTTTCCCTGTTTGAAAGGGCATGGCTGAGGGCTGCGTTGTGCTT
CTGCCTCTGTACGGCGGTATGCGCCTCCTGCTCCGTGGACAGGCACATGGAAAAAAAGGCGGGGGAATTGATGGCCAGGA
TGGATGCCGTTCCCGATTGGCGGCAGCTGCCGCGGAAGGAAATCTCATGGCACCAGGCCCTGGCGATGATGATGGAGCGG
AACATTGACTTGAAAAAATCGGAGCAGTCCCTCAAGACGACGAAACGTTCCGTCGTTAATGTTTTTACCCAGATTATCCC
CGGAGTCAATCTGGACTGGATGCTGACCAAGGAATTGAGCGACCTGGCCAGGGTGACGGCCAGCGATGTGGAATACAATA
CGAACATTCTGTTCAACATGCCGTCCCTCACCCAGATCCCGTTTGATTATTATTCCGCCAAGGCGGCTGTTTATACGGCG
GAAAAGACGCTGGAGATGAAAAAAAGGGAGCTGGTGGCCAGATTGTACCAGCAGGTGCTTTCCTACCGGAACGCGCAGAT
CAGCTACAATAACCAGCTGAGCTCCCTGCCTTATGACGATGATGGCGTCCAGAAAAAGAAGCTGGACCTGGAACGGGAGC
GGAATTTGAATGAGATTTCCCAGGGGTTTGCCGTGTTGCTGGGGAATATGGACGCCCGGTGGCTGGTGAACCCTGAAACG
ATGCCCAGGCTGGACTGGGGCAGGTACAGGGCGGCGTCCCGGCAGCTGGATCTGCTGGTGGTGACGATGGTGGCCATGGA
GCTGGAAGCTTCCCGCCTCCAGGTGCTGAATGCCAAACTGAAGTTCTTCCCGTCCGTGGATATTAATTTTTACAGCCCAA
CCCTGTTTTCCAGCACGGGCGGGACGTACGGCGGTTTTTTTGCGGGAGCGGGCGATATGAAGGTGAACATGAGCCTGCGG
GAAGAACTGGATACGCGCCTGACATCCTGGTTCCAGTATAAGTCGGCCAAAGAAAGCCACGAACTGCTGCAGCGCGAAGT
GGTGATGGAACTGCAGCGGCGGCGTATCAAGATAGCCGCGTTGCTGGAGAGCCGCAGGAGGTTTGAGCTCTGGCAGGGGG
TGCTGATGAAGGAAATCGCGTTCAAGGAGTCCAGATTATCCGTTTCCGGAGATGAATATCTGGAACAGAGGAAGGATATC
AGGAAAATGTATGCTGACCTGGATAATGAAGCTTCCAAGAATGCGGAGGTGGAAGCGGCCCTCATCATGGAATATGGCTG
GCTGAAGTAA

Upstream 100 bases:

>100_bases
CGAATTCCCTGCGCTCCAGGACTTCTTTTTCCTTCTTTCCCCTCCTGCCGTGTTGATGCTTGACTTTTCAGGGGCAGAAG
CTATGTAACAAGGGGCCTGT

Downstream 100 bases:

>100_bases
GGCGGGGGAGGATGAACAGTCCCTGTGTGACTGCGGGGGCTTCCTTTCTTGATGCTTTCAAGGGCTTGTGCTATGTTCCG
GATATGCAAAAAGTTCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER
NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA
EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET
MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR
EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI
RKMYADLDNEASKNAEVEAALIMEYGWLK

Sequences:

>Translated_429_residues
MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER
NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA
EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET
MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR
EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI
RKMYADLDNEASKNAEVEAALIMEYGWLK
>Mature_429_residues
MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDWRQLPRKEISWHQALAMMMER
NIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELSDLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTA
EKTLEMKKRELVARLYQQVLSYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET
MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTGGTYGGFFAGAGDMKVNMSLR
EELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAALLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDI
RKMYADLDNEASKNAEVEAALIMEYGWLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49684; Mature: 49684

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH
RQLPRKEISWHQALAMMMERNIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELS
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
DLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTAEKTLEMKKRELVARLYQQVL
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHH
SYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET
HHCCCCEEECCCCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCC
MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
GTYGGFFAGAGDMKVNMSLREELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAA
CCCCCCEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDIRKMYADLDNEASKNAEVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LIMEYGWLK
HHHHCCCCC
>Mature Secondary Structure
MFPFPPVVRSFLFSLFERAWLRAALCFCLCTAVCASCSVDRHMEKKAGELMARMDAVPDW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH
RQLPRKEISWHQALAMMMERNIDLKKSEQSLKTTKRSVVNVFTQIIPGVNLDWMLTKELS
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
DLARVTASDVEYNTNILFNMPSLTQIPFDYYSAKAAVYTAEKTLEMKKRELVARLYQQVL
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHH
SYRNAQISYNNQLSSLPYDDDGVQKKKLDLERERNLNEISQGFAVLLGNMDARWLVNPET
HHCCCCEEECCCCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHCCCCCCEEECCCC
MPRLDWGRYRAASRQLDLLVVTMVAMELEASRLQVLNAKLKFFPSVDINFYSPTLFSSTG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
GTYGGFFAGAGDMKVNMSLREELDTRLTSWFQYKSAKESHELLQREVVMELQRRRIKIAA
CCCCCCEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLESRRRFELWQGVLMKEIAFKESRLSVSGDEYLEQRKDIRKMYADLDNEASKNAEVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LIMEYGWLK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA