| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is cat3 [H]
Identifier: 187734841
GI number: 187734841
Start: 390524
End: 391159
Strand: Reverse
Name: cat3 [H]
Synonym: Amuc_0333
Alternate gene names: 187734841
Gene position: 391159-390524 (Counterclockwise)
Preceding gene: 187734842
Following gene: 187734840
Centisome position: 14.68
GC content: 53.3
Gene sequence:
>636_bases ATGAAAAAGAAAATAGAAATCTCTTCCTGGCCTCGAAAGTCTCATTATGAGTATTTCCAGACGTTTGACTGCCCCATGTT TTCCATTACGTCCCCGGTCCGGGTGGATGCCCTGTACCGTTATGCGAAACGGGAGGGGGTTTCCTTTTTCATTTTGTGCC TGTTTGTGCTGCTGAAGGCGTTGAACAGGGTGCCCCAGCTGCGCCAGCGGGTGGAGGAAGGGGATGTATGGGAGTATGAG TCCGTGGATGCCCTGGTTCCAGTGCTGGCTGCGGATGGAGAATTCACTCAGATTTTAGTGGAATACCGGATGGAGTTGTC TGATTTCCTGAAACATGCCGTTCCTCTTGTGCAGGCTGCCAAACTTGCTCCCGCCCAGGCGAATCCGTGCCATAGGGCGG ATATCGCCGTATTCAGCTGCCTGCCGTGGATTCCATTCACACAGGTGGCCAGCGCCTACAGAGTGTTTCGGGGACAATAC TTTCCCCTCATCCATTGGGGGAAGATGGAGGCGGATGCTTCCGGCAGGATGGTGATGCCCGTGGCCATTCAGGCAAACCA TGTGCTGGTGGACGGGGTGCATGTGGGCCGTTTTTACGGTATTCTGGAAGAATTGTGCGGAAATCAATTCTGTTAA
Upstream 100 bases:
>100_bases TGGGAACAGCCGGGTTGGAATTTCCGGTAGAGCCGGGGAATAATGGAAGGAAAGAAGCTGTTGTGAAACGGGGAGCCTTC CCTGAATAGAAAATAAGTGC
Downstream 100 bases:
>100_bases AAGGATTTTTCCGTGGCGTGGTTCCAACAGAACTTGAGTTTGTGAATTGAGGTGAATCAAGATGAATTTGAACTGGATGC AAAATACTGAATAATAACGC
Product: chloramphenicol acetyltransferase
Products: NA
Alternate protein names: Chloramphenicol acetyltransferase III; CAT-III [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKKKIEISSWPRKSHYEYFQTFDCPMFSITSPVRVDALYRYAKREGVSFFILCLFVLLKALNRVPQLRQRVEEGDVWEYE SVDALVPVLAADGEFTQILVEYRMELSDFLKHAVPLVQAAKLAPAQANPCHRADIAVFSCLPWIPFTQVASAYRVFRGQY FPLIHWGKMEADASGRMVMPVAIQANHVLVDGVHVGRFYGILEELCGNQFC
Sequences:
>Translated_211_residues MKKKIEISSWPRKSHYEYFQTFDCPMFSITSPVRVDALYRYAKREGVSFFILCLFVLLKALNRVPQLRQRVEEGDVWEYE SVDALVPVLAADGEFTQILVEYRMELSDFLKHAVPLVQAAKLAPAQANPCHRADIAVFSCLPWIPFTQVASAYRVFRGQY FPLIHWGKMEADASGRMVMPVAIQANHVLVDGVHVGRFYGILEELCGNQFC >Mature_211_residues MKKKIEISSWPRKSHYEYFQTFDCPMFSITSPVRVDALYRYAKREGVSFFILCLFVLLKALNRVPQLRQRVEEGDVWEYE SVDALVPVLAADGEFTQILVEYRMELSDFLKHAVPLVQAAKLAPAQANPCHRADIAVFSCLPWIPFTQVASAYRVFRGQY FPLIHWGKMEADASGRMVMPVAIQANHVLVDGVHVGRFYGILEELCGNQFC
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG4845
COG function: function code V; Chloramphenicol O-acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloramphenicol acetyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023213 - InterPro: IPR018372 - InterPro: IPR001707 - ProDom: PD002660 [H]
Pfam domain/function: PF00302 CAT [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 24139; Mature: 24139
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIEISSWPRKSHYEYFQTFDCPMFSITSPVRVDALYRYAKREGVSFFILCLFVLLKA CCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH LNRVPQLRQRVEEGDVWEYESVDALVPVLAADGEFTQILVEYRMELSDFLKHAVPLVQAA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAPAQANPCHRADIAVFSCLPWIPFTQVASAYRVFRGQYFPLIHWGKMEADASGRMVMP HCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE VAIQANHVLVDGVHVGRFYGILEELCGNQFC EEEECCEEEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKKIEISSWPRKSHYEYFQTFDCPMFSITSPVRVDALYRYAKREGVSFFILCLFVLLKA CCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH LNRVPQLRQRVEEGDVWEYESVDALVPVLAADGEFTQILVEYRMELSDFLKHAVPLVQAA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAPAQANPCHRADIAVFSCLPWIPFTQVASAYRVFRGQYFPLIHWGKMEADASGRMVMP HCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEE VAIQANHVLVDGVHVGRFYGILEELCGNQFC EEEECCEEEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3048245; 3288984; 2187098 [H]