| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734840
Identifier: 187734840
GI number: 187734840
Start: 389801
End: 390250
Strand: Reverse
Name: 187734840
Synonym: Amuc_0332
Alternate gene names: NA
Gene position: 390250-389801 (Counterclockwise)
Preceding gene: 187734841
Following gene: 187734839
Centisome position: 14.65
GC content: 50.22
Gene sequence:
>450_bases ATGGCAACAACACCCTCTCCGAAAAAATTGACACCGTTTCATGTTCGCAACAAGGACTTGAAAAAGGATACCGCGACTCT GTTTATCCGCATCCATACCCGAAAGATTGATGTGCTTATTTCGACATTGCTCCAAGTGGAGGTGAACGAATGGCTGAAAG CCACCGCTTCGCCACGTGCGTGGCTGGCGCATCAGAAGAAGAATTACCAACTTCATGCCAAGCTAACGCAGATTGAAGGC ATCGTAAAGGCTCACATGGCGAAAATTGATTTCGATCGTGAGGCTCTCGACATGGATGTGCGCTACATATCCGAGTCTGA AAAGGTGGATGCAGAGCGCAGGGCAAAAGAGGAAGCAGCCGCAGCCGAGCGGAAGGCGATTACCAAGCGTGAAGAGGCGA GAGAAAAGGCGCGAACGGCTATATGGAGAAGGTTGTCAACAAGCATCTGA
Upstream 100 bases:
>100_bases TTGACAAATGGCAGTTTGAGTTGTTATATTTGCAGAACCAAAGTGGCTGACAGGGAACAACTGTGAAAGCCGACATTCAA ATTTAACGACAAACAAATAT
Downstream 100 bases:
>100_bases CCAACCTGAAAGCTTTGATAAACGCCGCTTTCATTGATGGTGTGCATGACACAACCAACGTGCCGCTTCGCTGATTGTGA AGAACAAGATTGAAGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MATTPSPKKLTPFHVRNKDLKKDTATLFIRIHTRKIDVLISTLLQVEVNEWLKATASPRAWLAHQKKNYQLHAKLTQIEG IVKAHMAKIDFDREALDMDVRYISESEKVDAERRAKEEAAAAERKAITKREEAREKARTAIWRRLSTSI
Sequences:
>Translated_149_residues MATTPSPKKLTPFHVRNKDLKKDTATLFIRIHTRKIDVLISTLLQVEVNEWLKATASPRAWLAHQKKNYQLHAKLTQIEG IVKAHMAKIDFDREALDMDVRYISESEKVDAERRAKEEAAAAERKAITKREEAREKARTAIWRRLSTSI >Mature_148_residues ATTPSPKKLTPFHVRNKDLKKDTATLFIRIHTRKIDVLISTLLQVEVNEWLKATASPRAWLAHQKKNYQLHAKLTQIEGI VKAHMAKIDFDREALDMDVRYISESEKVDAERRAKEEAAAAERKAITKREEAREKARTAIWRRLSTSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17230; Mature: 17099
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPSPKKLTPFHVRNKDLKKDTATLFIRIHTRKIDVLISTLLQVEVNEWLKATASPRA CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHH WLAHQKKNYQLHAKLTQIEGIVKAHMAKIDFDREALDMDVRYISESEKVDAERRAKEEAA HHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH AAERKAITKREEAREKARTAIWRRLSTSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATTPSPKKLTPFHVRNKDLKKDTATLFIRIHTRKIDVLISTLLQVEVNEWLKATASPRA CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHH WLAHQKKNYQLHAKLTQIEGIVKAHMAKIDFDREALDMDVRYISESEKVDAERRAKEEAA HHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH AAERKAITKREEAREKARTAIWRRLSTSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA