| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is pyrG [H]
Identifier: 187734683
GI number: 187734683
Start: 208398
End: 210005
Strand: Direct
Name: pyrG [H]
Synonym: Amuc_0170
Alternate gene names: 187734683
Gene position: 208398-210005 (Clockwise)
Preceding gene: 187734682
Following gene: 187734684
Centisome position: 7.82
GC content: 57.71
Gene sequence:
>1608_bases ATGAAATATATCTTCGTCACAGGCGGTGTTGTCTCCTCTCTCGGCAAAGGACTGGCGGCGGCATCCATCGGCACGCTGCT GGAACGCTGCGGACTCAAGGTAACCCTTCAAAAATTCGACCCCTACCTGAATGTGGACCCCGGAACGATGAGCCCGTTCC AGCACGGGGAAGTGTACGTCTTGAACGACGGAGCGGAAACGGACCTGGACCTGGGCCATTACGAACGCTTCGTCCATTGC AGCCTCTCCCGGCTCAACAACCTCACTTCCGGACAGGTCTTTGAAAGCGTGCTGCGGAAGGAACGCCGGGGAGACTATCT GGGAAAAACGGTTCAATACATTCCGCATGTCACGGATGAAATCAAAAACCGCCTCTATGAAGTCACGGAAAAATCAGACG TGGACATCATCATCACGGAAATCGGCGGCACGGTCGGGGACATGGAAGGCCACATTTTCCTGGAAGCCCTGCGCCAATTC GCCCTGGAAGTGGGCCGTGACAACGTCTGCTTCATTCACGTCACCCTGCTCCCCTATATCAAGGCCGCCGGGGAAATGAA AACGAAGCCCACCCAGCAATCCGTCGCCAAGCTCCGGGAAATCGGCATCCAGCCGGACGTGATCATCTGCCGGACGGAAT ACGACATGAGTGAAGACGAACGCCGCAAAATCGCCATGTTCTGCAACGTGGAAGCCAAAAACGTCATTGCCTTCCGCGAC GTCAAAAACACCATCTACGAATGCCCCCTGGATCTCAGCCAGGATAAAATAGACCGCATTGTCACCAGGCGGCTGGGACT GGACGTTCCGGCGCCCAATCTGGCGGACTGGCAGCGTTACGTCGGCAGGGTCATCAGCCCCAGCCACTCCATCAGGATTG CCGTAGTAGGTAAATACATCGCTCTCCAGGACGCCTACAAATCCATCTATGAATCCTTCACTCACGCCGGTGCGGAAAAT GACGCCCGCGTGGAAATTCTCCGGATAGACGCGGAAGAAATTGAGGAAAAGGGCGCGGAGGCCATGATTGGCTCCGTGGA CGGCATTCTGGTGCCGGGCGGCTTTGGAGACCGCGGCATTGAAGGAAAAATCCAGACGGTGGAATACGCGCGCACCAAAG GAATCCCGTTCCTGGGCATTTGCCTGGGCATGCAGGTGGCCGTCATTGAGTACGCACGCCACATCTGCGGCATGGATGAC GCCAACTCCACGGAATTCGACCAGAAAACCACCCACCCAGTCATCAGCCTCCAGGAAGAGCAAAAAGGCATCAAGGCCAT GGGAGCCACCATGCGCCTGGGCGCCTACAAGGCCCTGATCCAGCCCGGAACGCTGGCGCACAAGCTTTACGGCAAGGACA GCGTTACGGAACGCCACCGCCACCGGTACGAATTCAACCCGGCCTACCGCGACGAACTGGAAAACGCGGGGCTGGTCATC AGCGCCGTCAATGACGAACACGGACTGGTGGAAGTCGTGGAACTTCCCGATCATCCCTTCTTCATCGCCTGCCAGTACCA TCCGGAATTCCAGTCCGCTCCCAACCGGGCCCACCCGCTCTTTTCCGGCCTGGTTTCAGCCGCGCTGGAGCACAAGAGCC ACTCCTGA
Upstream 100 bases:
>100_bases CGGGTCATCCTGACGGACCACGTCAGTGTGGGCGTGGATACGCCGGAACAGGCGGAACAGGTGGAACAAATCTTATTAAA CATACACTAGGAAGCAAATC
Downstream 100 bases:
>100_bases CCCTTTCATTAAGCCCGGGGCCTTTTCCGGAATTTCCATTCCGGAAAAGGCCTTCTCTTTCCAGGCATGCTCACGGACCT TTTCGTCATCGTCATTTACT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MKYIFVTGGVVSSLGKGLAAASIGTLLERCGLKVTLQKFDPYLNVDPGTMSPFQHGEVYVLNDGAETDLDLGHYERFVHC SLSRLNNLTSGQVFESVLRKERRGDYLGKTVQYIPHVTDEIKNRLYEVTEKSDVDIIITEIGGTVGDMEGHIFLEALRQF ALEVGRDNVCFIHVTLLPYIKAAGEMKTKPTQQSVAKLREIGIQPDVIICRTEYDMSEDERRKIAMFCNVEAKNVIAFRD VKNTIYECPLDLSQDKIDRIVTRRLGLDVPAPNLADWQRYVGRVISPSHSIRIAVVGKYIALQDAYKSIYESFTHAGAEN DARVEILRIDAEEIEEKGAEAMIGSVDGILVPGGFGDRGIEGKIQTVEYARTKGIPFLGICLGMQVAVIEYARHICGMDD ANSTEFDQKTTHPVISLQEEQKGIKAMGATMRLGAYKALIQPGTLAHKLYGKDSVTERHRHRYEFNPAYRDELENAGLVI SAVNDEHGLVEVVELPDHPFFIACQYHPEFQSAPNRAHPLFSGLVSAALEHKSHS
Sequences:
>Translated_535_residues MKYIFVTGGVVSSLGKGLAAASIGTLLERCGLKVTLQKFDPYLNVDPGTMSPFQHGEVYVLNDGAETDLDLGHYERFVHC SLSRLNNLTSGQVFESVLRKERRGDYLGKTVQYIPHVTDEIKNRLYEVTEKSDVDIIITEIGGTVGDMEGHIFLEALRQF ALEVGRDNVCFIHVTLLPYIKAAGEMKTKPTQQSVAKLREIGIQPDVIICRTEYDMSEDERRKIAMFCNVEAKNVIAFRD VKNTIYECPLDLSQDKIDRIVTRRLGLDVPAPNLADWQRYVGRVISPSHSIRIAVVGKYIALQDAYKSIYESFTHAGAEN DARVEILRIDAEEIEEKGAEAMIGSVDGILVPGGFGDRGIEGKIQTVEYARTKGIPFLGICLGMQVAVIEYARHICGMDD ANSTEFDQKTTHPVISLQEEQKGIKAMGATMRLGAYKALIQPGTLAHKLYGKDSVTERHRHRYEFNPAYRDELENAGLVI SAVNDEHGLVEVVELPDHPFFIACQYHPEFQSAPNRAHPLFSGLVSAALEHKSHS >Mature_535_residues MKYIFVTGGVVSSLGKGLAAASIGTLLERCGLKVTLQKFDPYLNVDPGTMSPFQHGEVYVLNDGAETDLDLGHYERFVHC SLSRLNNLTSGQVFESVLRKERRGDYLGKTVQYIPHVTDEIKNRLYEVTEKSDVDIIITEIGGTVGDMEGHIFLEALRQF ALEVGRDNVCFIHVTLLPYIKAAGEMKTKPTQQSVAKLREIGIQPDVIICRTEYDMSEDERRKIAMFCNVEAKNVIAFRD VKNTIYECPLDLSQDKIDRIVTRRLGLDVPAPNLADWQRYVGRVISPSHSIRIAVVGKYIALQDAYKSIYESFTHAGAEN DARVEILRIDAEEIEEKGAEAMIGSVDGILVPGGFGDRGIEGKIQTVEYARTKGIPFLGICLGMQVAVIEYARHICGMDD ANSTEFDQKTTHPVISLQEEQKGIKAMGATMRLGAYKALIQPGTLAHKLYGKDSVTERHRHRYEFNPAYRDELENAGLVI SAVNDEHGLVEVVELPDHPFFIACQYHPEFQSAPNRAHPLFSGLVSAALEHKSHS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=556, Percent_Identity=45.863309352518, Blast_Score=494, Evalue=1e-140, Organism=Homo sapiens, GI28559085, Length=550, Percent_Identity=44.3636363636364, Blast_Score=471, Evalue=1e-133, Organism=Homo sapiens, GI28559083, Length=550, Percent_Identity=44.3636363636364, Blast_Score=471, Evalue=1e-133, Organism=Homo sapiens, GI221316689, Length=550, Percent_Identity=44.3636363636364, Blast_Score=471, Evalue=1e-133, Organism=Escherichia coli, GI1789142, Length=541, Percent_Identity=51.9408502772643, Blast_Score=568, Evalue=1e-163, Organism=Caenorhabditis elegans, GI25148299, Length=602, Percent_Identity=38.2059800664452, Blast_Score=416, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6322563, Length=566, Percent_Identity=43.8162544169611, Blast_Score=456, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319432, Length=562, Percent_Identity=42.7046263345196, Blast_Score=448, Evalue=1e-127, Organism=Drosophila melanogaster, GI24664469, Length=552, Percent_Identity=44.7463768115942, Blast_Score=473, Evalue=1e-133, Organism=Drosophila melanogaster, GI21357815, Length=496, Percent_Identity=42.5403225806452, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59585; Mature: 59585
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIFVTGGVVSSLGKGLAAASIGTLLERCGLKVTLQKFDPYLNVDPGTMSPFQHGEVYV CEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCEEEE LNDGAETDLDLGHYERFVHCSLSRLNNLTSGQVFESVLRKERRGDYLGKTVQYIPHVTDE ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH IKNRLYEVTEKSDVDIIITEIGGTVGDMEGHIFLEALRQFALEVGRDNVCFIHVTLLPYI HHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHH KAAGEMKTKPTQQSVAKLREIGIQPDVIICRTEYDMSEDERRKIAMFCNVEAKNVIAFRD HHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHH VKNTIYECPLDLSQDKIDRIVTRRLGLDVPAPNLADWQRYVGRVISPSHSIRIAVVGKYI HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHH ALQDAYKSIYESFTHAGAENDARVEILRIDAEEIEEKGAEAMIGSVDGILVPGGFGDRGI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCHHHEEECCCCEEECCCCCCCCC EGKIQTVEYARTKGIPFLGICLGMQVAVIEYARHICGMDDANSTEFDQKTTHPVISLQEE CCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHH QKGIKAMGATMRLGAYKALIQPGTLAHKLYGKDSVTERHRHRYEFNPAYRDELENAGLVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEE SAVNDEHGLVEVVELPDHPFFIACQYHPEFQSAPNRAHPLFSGLVSAALEHKSHS EEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKYIFVTGGVVSSLGKGLAAASIGTLLERCGLKVTLQKFDPYLNVDPGTMSPFQHGEVYV CEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCEEEE LNDGAETDLDLGHYERFVHCSLSRLNNLTSGQVFESVLRKERRGDYLGKTVQYIPHVTDE ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH IKNRLYEVTEKSDVDIIITEIGGTVGDMEGHIFLEALRQFALEVGRDNVCFIHVTLLPYI HHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHH KAAGEMKTKPTQQSVAKLREIGIQPDVIICRTEYDMSEDERRKIAMFCNVEAKNVIAFRD HHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHH VKNTIYECPLDLSQDKIDRIVTRRLGLDVPAPNLADWQRYVGRVISPSHSIRIAVVGKYI HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHH ALQDAYKSIYESFTHAGAENDARVEILRIDAEEIEEKGAEAMIGSVDGILVPGGFGDRGI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCHHHEEECCCCEEECCCCCCCCC EGKIQTVEYARTKGIPFLGICLGMQVAVIEYARHICGMDDANSTEFDQKTTHPVISLQEE CCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHH QKGIKAMGATMRLGAYKALIQPGTLAHKLYGKDSVTERHRHRYEFNPAYRDELENAGLVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEE SAVNDEHGLVEVVELPDHPFFIACQYHPEFQSAPNRAHPLFSGLVSAALEHKSHS EEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA