| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is sglT [H]
Identifier: 187734684
GI number: 187734684
Start: 210072
End: 211634
Strand: Direct
Name: sglT [H]
Synonym: Amuc_0171
Alternate gene names: 187734684
Gene position: 210072-211634 (Clockwise)
Preceding gene: 187734683
Following gene: 187734686
Centisome position: 7.89
GC content: 57.52
Gene sequence:
>1563_bases ATGCTCACGGACCTTTTCGTCATCGTCATTTACTTTCTTGCTATCTTCTGCATTGGCATTTATGCGGGACGAAAGCAAAA CTCCCTGACAGACTATGCCCTGGGCAACCGCTCCCTGCCCTGGTGGGCTATTCTGGCCTCTATCCTGGCGGCGGAAATCA GCGCGGCCACCTTCCTGGGGGCTCCCGGAGAAGGGTACCATACCCGCAACTTCACATACGCCCAGCTCTGCATCGGCACC ATCCTGGGCCGCATCATCGTCGGCAGGCTCTTTCTCAAGCCCTATTATGACTACAAGGTTGTTTCCATCTATGAATACCT GGAAAAAAGATTCGGGCTCCTGACGCGGCGGACAGCCTCCATGGTCTTCCTGATCAGCCGGGTGCTCGCCAGCGGAACCA GGCTCTATTTCGCGGGCATTCTGCTGGTCATTGCCTACCAGTTCCTGACAGGCGTCACGGCAGACGCCGACCAGATTGTC CTGCTCTACATTGCCGCCCTGGTTGCCATCTCCGTCGCCACGACAATTTATACCGCGATCGGAGGATTGAAAGCCGTCGT CTGGACGGACGTCCTCCAGGCCGTCGTTCTGGGAGTCTCCATGCTTTCCGCCCTGTGGGTACTGTTCTCCCATATCCCCG GAGGGTGGAGCTCCATCTCCGCCGCCATGAATGGCGGAGACGATTGGAAATTCTTCTCCTGGGGAACCGGAGAAGGCCTG GACTTCCTCCAACAAGGCGCCCGCGTGCTGGGCCAGGAATACACGGTGTGGGCAGCCTTCCTGGGAGCAACCTTCATCAC CATGGCTACGCATGGCACGGACCAGGACATGGTGCAGCGCATGCTGGCGGCAAAAAACAGCAAGGCGGGAACGCGTGCAG TCATCGTATCCGGCTTGCTGGACTTCCCCATCGTCATCATTTTCCTCTTCACGGGCATTCTTCTCTATGTCTTCTACCAA TACAACCCGGCAAACCTCCCTGCAGACACGCCGCAGCTGCATGTGTTTCCCTACTTCATCATCCATGAACTTCCCAACGG CATCCGCGGGCTGCTGATCGCCGGACTTCTGGCGACGGCCATGGGCTCCCTCTCCACGGCTCTAAACTCCCTGGCGACTA CCGCCACCAAGGACTGGTACCAGGGGATATTCAAACCGGAAGCCACGGAACGGCAGCTGCTCCGGTGCGTGCGCTGGGGA ACGGCCGTTTTCTCCCTGCTGCTCATCCTCGTGGGTTCCATCACAGCGTGGTATGTGGTGCATCACCCGGAAGTCCGCAT CATCCAAATAGCCCTGGGCATTTTCGGCTATACCTATGGCTCCCTGCTTGGCATTTTCCTGTTGGGAATGCTGACCCGCA CCAGAGGCAGCGACTCAGGAAACATCATTGCCATGGCGGCAGGATTCTTTGTCATCGCTTTACTGACGGAACTCATCCCT CTGCCCTCCGGCTGGCAACAATATGTTCCGGAAATAGCATTTCCGTGGCGCGTTACCATCGGAACTCTGGTTACTTTTAC CGTCGGCTTCTGTTTCAGAAAACGCCGCCTTCCCATGCGCTGA
Upstream 100 bases:
>100_bases TTCAGCCGCGCTGGAGCACAAGAGCCACTCCTGACCCTTTCATTAAGCCCGGGGCCTTTTCCGGAATTTCCATTCCGGAA AAGGCCTTCTCTTTCCAGGC
Downstream 100 bases:
>100_bases ACGGTGAACGCCGTTACTTGGCCACGTTCATGTTCCGCATTCCCCTTCAAACCGCCCCGTCAATGGGAGTAAAGGTGCAA GCGAAAAATAGGGGATTAGG
Product: SSS sodium solute transporter superfamily
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MLTDLFVIVIYFLAIFCIGIYAGRKQNSLTDYALGNRSLPWWAILASILAAEISAATFLGAPGEGYHTRNFTYAQLCIGT ILGRIIVGRLFLKPYYDYKVVSIYEYLEKRFGLLTRRTASMVFLISRVLASGTRLYFAGILLVIAYQFLTGVTADADQIV LLYIAALVAISVATTIYTAIGGLKAVVWTDVLQAVVLGVSMLSALWVLFSHIPGGWSSISAAMNGGDDWKFFSWGTGEGL DFLQQGARVLGQEYTVWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAGTRAVIVSGLLDFPIVIIFLFTGILLYVFYQ YNPANLPADTPQLHVFPYFIIHELPNGIRGLLIAGLLATAMGSLSTALNSLATTATKDWYQGIFKPEATERQLLRCVRWG TAVFSLLLILVGSITAWYVVHHPEVRIIQIALGIFGYTYGSLLGIFLLGMLTRTRGSDSGNIIAMAAGFFVIALLTELIP LPSGWQQYVPEIAFPWRVTIGTLVTFTVGFCFRKRRLPMR
Sequences:
>Translated_520_residues MLTDLFVIVIYFLAIFCIGIYAGRKQNSLTDYALGNRSLPWWAILASILAAEISAATFLGAPGEGYHTRNFTYAQLCIGT ILGRIIVGRLFLKPYYDYKVVSIYEYLEKRFGLLTRRTASMVFLISRVLASGTRLYFAGILLVIAYQFLTGVTADADQIV LLYIAALVAISVATTIYTAIGGLKAVVWTDVLQAVVLGVSMLSALWVLFSHIPGGWSSISAAMNGGDDWKFFSWGTGEGL DFLQQGARVLGQEYTVWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAGTRAVIVSGLLDFPIVIIFLFTGILLYVFYQ YNPANLPADTPQLHVFPYFIIHELPNGIRGLLIAGLLATAMGSLSTALNSLATTATKDWYQGIFKPEATERQLLRCVRWG TAVFSLLLILVGSITAWYVVHHPEVRIIQIALGIFGYTYGSLLGIFLLGMLTRTRGSDSGNIIAMAAGFFVIALLTELIP LPSGWQQYVPEIAFPWRVTIGTLVTFTVGFCFRKRRLPMR >Mature_520_residues MLTDLFVIVIYFLAIFCIGIYAGRKQNSLTDYALGNRSLPWWAILASILAAEISAATFLGAPGEGYHTRNFTYAQLCIGT ILGRIIVGRLFLKPYYDYKVVSIYEYLEKRFGLLTRRTASMVFLISRVLASGTRLYFAGILLVIAYQFLTGVTADADQIV LLYIAALVAISVATTIYTAIGGLKAVVWTDVLQAVVLGVSMLSALWVLFSHIPGGWSSISAAMNGGDDWKFFSWGTGEGL DFLQQGARVLGQEYTVWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAGTRAVIVSGLLDFPIVIIFLFTGILLYVFYQ YNPANLPADTPQLHVFPYFIIHELPNGIRGLLIAGLLATAMGSLSTALNSLATTATKDWYQGIFKPEATERQLLRCVRWG TAVFSLLLILVGSITAWYVVHHPEVRIIQIALGIFGYTYGSLLGIFLLGMLTRTRGSDSGNIIAMAAGFFVIALLTELIP LPSGWQQYVPEIAFPWRVTIGTLVTFTVGFCFRKRRLPMR
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=455, Percent_Identity=26.1538461538462, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI256985183, Length=522, Percent_Identity=27.0114942528736, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI167466278, Length=466, Percent_Identity=26.6094420600858, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI157671931, Length=434, Percent_Identity=25.3456221198157, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI4507031, Length=449, Percent_Identity=27.1714922048998, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI14140236, Length=496, Percent_Identity=24.3951612903226, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI17941285, Length=416, Percent_Identity=24.7596153846154, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI4507033, Length=421, Percent_Identity=26.603325415677, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI110835708, Length=426, Percent_Identity=25.5868544600939, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI109659836, Length=447, Percent_Identity=25.503355704698, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI109659839, Length=465, Percent_Identity=25.5913978494624, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI206597483, Length=414, Percent_Identity=25.3623188405797, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI206597487, Length=438, Percent_Identity=23.5159817351598, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI87082237, Length=492, Percent_Identity=25.2032520325203, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790113, Length=413, Percent_Identity=22.0338983050847, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1787251, Length=397, Percent_Identity=23.1738035264484, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533094, Length=478, Percent_Identity=23.6401673640167, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI115533096, Length=336, Percent_Identity=23.8095238095238, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI28573698, Length=458, Percent_Identity=27.0742358078603, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI221459584, Length=448, Percent_Identity=27.6785714285714, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24645928, Length=461, Percent_Identity=28.1995661605206, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24651739, Length=458, Percent_Identity=26.6375545851528, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24641117, Length=492, Percent_Identity=27.0325203252033, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI221459588, Length=465, Percent_Identity=27.3118279569892, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI161076631, Length=461, Percent_Identity=28.4164859002169, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24651741, Length=487, Percent_Identity=24.2299794661191, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI221459586, Length=474, Percent_Identity=25.3164556962025, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24650192, Length=446, Percent_Identity=26.2331838565022, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24640370, Length=480, Percent_Identity=25.8333333333333, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI19920916, Length=452, Percent_Identity=26.5486725663717, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI221379702, Length=445, Percent_Identity=25.3932584269663, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281362054, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI281362052, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI281362050, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24648056, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI21356827, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI281364280, Length=465, Percent_Identity=24.5161290322581, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI28574994, Length=467, Percent_Identity=23.7687366167024, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281362918, Length=507, Percent_Identity=24.2603550295858, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI221459582, Length=444, Percent_Identity=24.5495495495495, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 57236; Mature: 57236
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00501 SPASE_I_1 ; PS00211 ABC_TRANSPORTER_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDLFVIVIYFLAIFCIGIYAGRKQNSLTDYALGNRSLPWWAILASILAAEISAATFLG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC APGEGYHTRNFTYAQLCIGTILGRIIVGRLFLKPYYDYKVVSIYEYLEKRFGLLTRRTAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH MVFLISRVLASGTRLYFAGILLVIAYQFLTGVTADADQIVLLYIAALVAISVATTIYTAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGLKAVVWTDVLQAVVLGVSMLSALWVLFSHIPGGWSSISAAMNGGDDWKFFSWGTGEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCH DFLQQGARVLGQEYTVWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAGTRAVIVSGLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH DFPIVIIFLFTGILLYVFYQYNPANLPADTPQLHVFPYFIIHELPNGIRGLLIAGLLATA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHH MGSLSTALNSLATTATKDWYQGIFKPEATERQLLRCVRWGTAVFSLLLILVGSITAWYVV HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HHPEVRIIQIALGIFGYTYGSLLGIFLLGMLTRTRGSDSGNIIAMAAGFFVIALLTELIP ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCC LPSGWQQYVPEIAFPWRVTIGTLVTFTVGFCFRKRRLPMR CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLTDLFVIVIYFLAIFCIGIYAGRKQNSLTDYALGNRSLPWWAILASILAAEISAATFLG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC APGEGYHTRNFTYAQLCIGTILGRIIVGRLFLKPYYDYKVVSIYEYLEKRFGLLTRRTAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH MVFLISRVLASGTRLYFAGILLVIAYQFLTGVTADADQIVLLYIAALVAISVATTIYTAI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGLKAVVWTDVLQAVVLGVSMLSALWVLFSHIPGGWSSISAAMNGGDDWKFFSWGTGEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCH DFLQQGARVLGQEYTVWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAGTRAVIVSGLL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH DFPIVIIFLFTGILLYVFYQYNPANLPADTPQLHVFPYFIIHELPNGIRGLLIAGLLATA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHH MGSLSTALNSLATTATKDWYQGIFKPEATERQLLRCVRWGTAVFSLLLILVGSITAWYVV HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HHPEVRIIQIALGIFGYTYGSLLGIFLLGMLTRTRGSDSGNIIAMAAGFFVIALLTELIP ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCC LPSGWQQYVPEIAFPWRVTIGTLVTFTVGFCFRKRRLPMR CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]