Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734630

Identifier: 187734630

GI number: 187734630

Start: 143259

End: 144851

Strand: Reverse

Name: 187734630

Synonym: Amuc_0116

Alternate gene names: NA

Gene position: 144851-143259 (Counterclockwise)

Preceding gene: 187734631

Following gene: 187734629

Centisome position: 5.44

GC content: 62.84

Gene sequence:

>1593_bases
GTGAGCGGAGGGGAAGGAATAACGGTGGATGTGATTCTGCCGATGGAAAAGGCCGGCAGCGAGCGCGTGCGCCGCGCTGC
CGTGGCGCGGAAGCTGGGTATTTCCCCCTCCCGTATCAAAGATGTGCGGCTGGTGAAGGAGTCCATTGACTCCCGGCAGA
AAAAAATTCTCTTCCAGCTTCGGCTGCTGGTCGGGGTGGATAGCCCGCTGCCGCCGGAACGTCTTCCCTCCCGGGATTAT
CCGTCCGTCCGTCCCGGCTCCCCCGTGGCGCTGATCGTTGGATTCGGACCGGCCGGGATGTTCGCCGCGCTCCGCTGTTT
GGAACTGGGTATGAAGCCTGTGGTTCTGGAACGGGGGAAGGATGTTTCCTCCCGCCGGTTTGACCTGGCTCCCATCCTGC
GCCGCGGCACGGTGATGGAGGATTCCAATTACTGTTTTGGAGAGGGAGGGGCAGGCACGTTTTCCGACGGGAAGCTGTTT
ACGCGCGCCACCAAGAGAGGCCCCGTCCGGGAGGTTTACGAGATTTTTGTAGCCCACGGAGCGCCCAGGGAAATTTTAAC
GGACGCCCACCCGCATATCGGCTCCAATCTGTTGCCCAATGTTGTCAAAGCCATCAGGGAATCCATCCTTCGCGCGGGCG
GGGAAATTCATTTCAATGCCCGTGTGGAGCATCTGCTCCGTTCTGCGGACGGCCGCCGCATACGCGGCGTGGCCTGCGCG
GATGGCCGGGAATTTGCGGCGGATTCCGTTTTGCTGGCTACCGGGCACAGTGCCCGGGACGTGTACCGCATGATGCTGGC
GGAGAGGCTGGCTCTGGAACAGAAATCCTTTGCCGTGGGTGTGCGCATTGAGCATCCCCAGGCGTTTGTTGATGCGCGCC
AGTACCACCTGAATCCGGAGCAGAGGCGCCCGGAGCAGCTTCCGGCAGCCCGTTATTCCGTGACGACCACCATCCAGGAC
CGCGGCGTCCATTCCTTCTGCATGTGTCCCGGCGGCTTCATCGTGCCCGCCGCCACGGAGAACGATGAGGTAGTGGTCAA
CGGCATGTCTCTGGCCCGGAGGGATTCTCCATTTGCCAATGCCGGTTTTGTAGTCAGCGTGCATACGGAAGATACGGAAC
CGTTTTGCAGGGAACACGGGGTGCTGGCGGGCGTGGCGTACCAGAAAGCGCTGGAGACGGCTTCCTGCCGTGCCGGAGGA
GGCATGCAGAAAGCCCCGGCCCAGAAGGTGGAGGATTTTCTGAAAGGGCGCGTTTCTTCTTCCCTGCTGCCTACCAGCTA
TCATCCCGGCATCGTATCCCATCCCCTTCATGAATTGCTCCCGGAAGGGATTGTCTGGCGCATGCGGGAGGGGCTGCGGC
AGTTTGACCGTAAATGGCGGGGATTCGCCGGAGCGGACGCCCAGCTCATTGGCTGTGAGACGCGCACCAGCTCCCCCGTG
CGCATTCCAAGGGACCCCGCCACGCTGGAGCATCCCGGTCTGGAGGGCCTGTACCCATGCGGCGAAGGGGCGGGTTACGC
CGGCGGCATTGTTTCCGCCGCCCTGGACGGACGCCGTTGTGCGGAGGCCATGGCGCAGCAGGCGACCCGCTAG

Upstream 100 bases:

>100_bases
GAAAACAGGTAATAGGGGTGGATGCCCGCAAGCTGGTGCTGGAAGGCGGCGCCATCCACTGCATCACCCAGCAGCAGCCT
CGGCCGGGGAAGGAGGGACT

Downstream 100 bases:

>100_bases
GTTTTTTCAAGCGTCCGGCCGCCGGAGCGATGCAGTTTTTCTGCGTTTCTGGATGAAGATACGCCCCTGCGAGCCTTGTT
ATGCCGGAACCGGATGCCAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSGGEGITVDVILPMEKAGSERVRRAAVARKLGISPSRIKDVRLVKESIDSRQKKILFQLRLLVGVDSPLPPERLPSRDY
PSVRPGSPVALIVGFGPAGMFAALRCLELGMKPVVLERGKDVSSRRFDLAPILRRGTVMEDSNYCFGEGGAGTFSDGKLF
TRATKRGPVREVYEIFVAHGAPREILTDAHPHIGSNLLPNVVKAIRESILRAGGEIHFNARVEHLLRSADGRRIRGVACA
DGREFAADSVLLATGHSARDVYRMMLAERLALEQKSFAVGVRIEHPQAFVDARQYHLNPEQRRPEQLPAARYSVTTTIQD
RGVHSFCMCPGGFIVPAATENDEVVVNGMSLARRDSPFANAGFVVSVHTEDTEPFCREHGVLAGVAYQKALETASCRAGG
GMQKAPAQKVEDFLKGRVSSSLLPTSYHPGIVSHPLHELLPEGIVWRMREGLRQFDRKWRGFAGADAQLIGCETRTSSPV
RIPRDPATLEHPGLEGLYPCGEGAGYAGGIVSAALDGRRCAEAMAQQATR

Sequences:

>Translated_530_residues
MSGGEGITVDVILPMEKAGSERVRRAAVARKLGISPSRIKDVRLVKESIDSRQKKILFQLRLLVGVDSPLPPERLPSRDY
PSVRPGSPVALIVGFGPAGMFAALRCLELGMKPVVLERGKDVSSRRFDLAPILRRGTVMEDSNYCFGEGGAGTFSDGKLF
TRATKRGPVREVYEIFVAHGAPREILTDAHPHIGSNLLPNVVKAIRESILRAGGEIHFNARVEHLLRSADGRRIRGVACA
DGREFAADSVLLATGHSARDVYRMMLAERLALEQKSFAVGVRIEHPQAFVDARQYHLNPEQRRPEQLPAARYSVTTTIQD
RGVHSFCMCPGGFIVPAATENDEVVVNGMSLARRDSPFANAGFVVSVHTEDTEPFCREHGVLAGVAYQKALETASCRAGG
GMQKAPAQKVEDFLKGRVSSSLLPTSYHPGIVSHPLHELLPEGIVWRMREGLRQFDRKWRGFAGADAQLIGCETRTSSPV
RIPRDPATLEHPGLEGLYPCGEGAGYAGGIVSAALDGRRCAEAMAQQATR
>Mature_529_residues
SGGEGITVDVILPMEKAGSERVRRAAVARKLGISPSRIKDVRLVKESIDSRQKKILFQLRLLVGVDSPLPPERLPSRDYP
SVRPGSPVALIVGFGPAGMFAALRCLELGMKPVVLERGKDVSSRRFDLAPILRRGTVMEDSNYCFGEGGAGTFSDGKLFT
RATKRGPVREVYEIFVAHGAPREILTDAHPHIGSNLLPNVVKAIRESILRAGGEIHFNARVEHLLRSADGRRIRGVACAD
GREFAADSVLLATGHSARDVYRMMLAERLALEQKSFAVGVRIEHPQAFVDARQYHLNPEQRRPEQLPAARYSVTTTIQDR
GVHSFCMCPGGFIVPAATENDEVVVNGMSLARRDSPFANAGFVVSVHTEDTEPFCREHGVLAGVAYQKALETASCRAGGG
MQKAPAQKVEDFLKGRVSSSLLPTSYHPGIVSHPLHELLPEGIVWRMREGLRQFDRKWRGFAGADAQLIGCETRTSSPVR
IPRDPATLEHPGLEGLYPCGEGAGYAGGIVSAALDGRRCAEAMAQQATR

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 57661; Mature: 57530

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGEGITVDVILPMEKAGSERVRRAAVARKLGISPSRIKDVRLVKESIDSRQKKILFQL
CCCCCEEEEEEEECCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLLVGVDSPLPPERLPSRDYPSVRPGSPVALIVGFGPAGMFAALRCLELGMKPVVLERGK
HHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCC
DVSSRRFDLAPILRRGTVMEDSNYCFGEGGAGTFSDGKLFTRATKRGPVREVYEIFVAHG
CCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHCC
APREILTDAHPHIGSNLLPNVVKAIRESILRAGGEIHFNARVEHLLRSADGRRIRGVACA
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEEEEEC
DGREFAADSVLLATGHSARDVYRMMLAERLALEQKSFAVGVRIEHPQAFVDARQYHLNPE
CCCHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCHH
QRRPEQLPAARYSVTTTIQDRGVHSFCMCPGGFIVPAATENDEVVVNGMSLARRDSPFAN
HCCHHHCCCCCEEEEEEEHHCCCCEEEECCCCEEEECCCCCCCEEEECHHHHHCCCCCCC
AGFVVSVHTEDTEPFCREHGVLAGVAYQKALETASCRAGGGMQKAPAQKVEDFLKGRVSS
CCEEEEEECCCCCHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
SLLPTSYHPGIVSHPLHELLPEGIVWRMREGLRQFDRKWRGFAGADAQLIGCETRTSSPV
CCCCCCCCCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
RIPRDPATLEHPGLEGLYPCGEGAGYAGGIVSAALDGRRCAEAMAQQATR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGGEGITVDVILPMEKAGSERVRRAAVARKLGISPSRIKDVRLVKESIDSRQKKILFQL
CCCCEEEEEEEECCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLLVGVDSPLPPERLPSRDYPSVRPGSPVALIVGFGPAGMFAALRCLELGMKPVVLERGK
HHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCC
DVSSRRFDLAPILRRGTVMEDSNYCFGEGGAGTFSDGKLFTRATKRGPVREVYEIFVAHG
CCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHCC
APREILTDAHPHIGSNLLPNVVKAIRESILRAGGEIHFNARVEHLLRSADGRRIRGVACA
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEEEEEC
DGREFAADSVLLATGHSARDVYRMMLAERLALEQKSFAVGVRIEHPQAFVDARQYHLNPE
CCCHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCHH
QRRPEQLPAARYSVTTTIQDRGVHSFCMCPGGFIVPAATENDEVVVNGMSLARRDSPFAN
HCCHHHCCCCCEEEEEEEHHCCCCEEEECCCCEEEECCCCCCCEEEECHHHHHCCCCCCC
AGFVVSVHTEDTEPFCREHGVLAGVAYQKALETASCRAGGGMQKAPAQKVEDFLKGRVSS
CCEEEEEECCCCCHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
SLLPTSYHPGIVSHPLHELLPEGIVWRMREGLRQFDRKWRGFAGADAQLIGCETRTSSPV
CCCCCCCCCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
RIPRDPATLEHPGLEGLYPCGEGAGYAGGIVSAALDGRRCAEAMAQQATR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]