| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734629
Identifier: 187734629
GI number: 187734629
Start: 142404
End: 142976
Strand: Reverse
Name: 187734629
Synonym: Amuc_0115
Alternate gene names: NA
Gene position: 142976-142404 (Counterclockwise)
Preceding gene: 187734630
Following gene: 187734628
Centisome position: 5.37
GC content: 49.39
Gene sequence:
>573_bases ATGACTTTTTCCGGCATGTCCCAGGATATAGCGGCGCCCTCCATGGCTAATGTGGATTTGGAAATGGAGGATGAAAAGAA AATAGCGGCGTACAGGGAGGCCATGGCCAGGCATTTGCAGCTGGGCATTATTTGGATGTGCATTGTGGAGTTGGAGGAAA AGGATAATCGTGCGGTGCTGGTGGCCACGCTGAAATATATTCAATCTCCCGAATGGGCTGGGATTCTGGATAAATGCCCT TCCGATTACCGCGCCATGCATCTGAAGATGATTAGGGAGTCCGGGAAATTGCTGGAACGGGTGGAAAGAGAGAAGATGAC TGCCGATGAAATTCAGAACGCTTACGGAAAGTACGGAGGCCAATACATGAAAATGGGGGGGAGCATTCTGGAAAAATATC GGCTGGAGAATTGTTCCGTACAGTTTTCTTTATACCTGATGCGGGAAACGGAAGGATTGGATGATAAGGAAAGGTTGAAG GCTCTTTACCGTATCAGGAAGGATATCCTCTCCGGAAAACTGAAGGTTCCCGGAGAGGGCGGAGGGATGGGCGAATCTGG GTTGGAGGAATGA
Upstream 100 bases:
>100_bases GCGGCGGAAGGGAAGAATATTGTTGACCCTGCGCAAAAGATTCCTGTAACGTGGTTCCATGTCAAATCTGTTCCGGTGGG GAATTCTCCCTGCGTTTTTG
Downstream 100 bases:
>100_bases CCGGGATGCCGGGCCAATTTCCCGGAACGGTTCCGGAACTCCTGTGTTTCCTTTCTCCCGTTGTCCATTTCCACCCGGGG CCTTCCTTTTTTTGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTFSGMSQDIAAPSMANVDLEMEDEKKIAAYREAMARHLQLGIIWMCIVELEEKDNRAVLVATLKYIQSPEWAGILDKCP SDYRAMHLKMIRESGKLLERVEREKMTADEIQNAYGKYGGQYMKMGGSILEKYRLENCSVQFSLYLMRETEGLDDKERLK ALYRIRKDILSGKLKVPGEGGGMGESGLEE
Sequences:
>Translated_190_residues MTFSGMSQDIAAPSMANVDLEMEDEKKIAAYREAMARHLQLGIIWMCIVELEEKDNRAVLVATLKYIQSPEWAGILDKCP SDYRAMHLKMIRESGKLLERVEREKMTADEIQNAYGKYGGQYMKMGGSILEKYRLENCSVQFSLYLMRETEGLDDKERLK ALYRIRKDILSGKLKVPGEGGGMGESGLEE >Mature_189_residues TFSGMSQDIAAPSMANVDLEMEDEKKIAAYREAMARHLQLGIIWMCIVELEEKDNRAVLVATLKYIQSPEWAGILDKCPS DYRAMHLKMIRESGKLLERVEREKMTADEIQNAYGKYGGQYMKMGGSILEKYRLENCSVQFSLYLMRETEGLDDKERLKA LYRIRKDILSGKLKVPGEGGGMGESGLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21615; Mature: 21484
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSGMSQDIAAPSMANVDLEMEDEKKIAAYREAMARHLQLGIIWMCIVELEEKDNRAVL CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH VATLKYIQSPEWAGILDKCPSDYRAMHLKMIRESGKLLERVEREKMTADEIQNAYGKYGG HHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC QYMKMGGSILEKYRLENCSVQFSLYLMRETEGLDDKERLKALYRIRKDILSGKLKVPGEG HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCC GGMGESGLEE CCCCCCCCCC >Mature Secondary Structure TFSGMSQDIAAPSMANVDLEMEDEKKIAAYREAMARHLQLGIIWMCIVELEEKDNRAVL CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH VATLKYIQSPEWAGILDKCPSDYRAMHLKMIRESGKLLERVEREKMTADEIQNAYGKYGG HHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC QYMKMGGSILEKYRLENCSVQFSLYLMRETEGLDDKERLKALYRIRKDILSGKLKVPGEG HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCC GGMGESGLEE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA