| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is aguA [H]
Identifier: 187734631
GI number: 187734631
Start: 144848
End: 145903
Strand: Reverse
Name: aguA [H]
Synonym: Amuc_0117
Alternate gene names: 187734631
Gene position: 145903-144848 (Counterclockwise)
Preceding gene: 187734632
Following gene: 187734630
Centisome position: 5.48
GC content: 60.42
Gene sequence:
>1056_bases ATGAACAAGGAACCCGATGTACGCTGGCCCGCTGAATGGGAGCCTCAGGATGCTGTCTGGCTGTCCTGGCCCCACCGCAG GGATTTATGGCAAGGGGGGCTGGACGAGTTGCAGCAGACTTATGGGAGCGTGGCCGCTGCCATTGCTCCGCATGCCCTTG TATGCGTGAATGCCGCAGCTCCCCTTCATCCCGGCGTCAGGCAGGCGATGCTGGCCTCCGGAATGAGTGAGGAGCAATTC CGCCTGTTCAACCACCCGACCAACGACGTATGGTGCCGGGACCACGGCCCCGTTTTCGTCCAGGATGTGAAGGACGGTTC CCTGATGCTGGCGGATTGGCAATTTAATGCGTGGGGCGGCAAATTTGCCCCGTGGGACCTGGACAACGGCGTTCCCGCCC TGATTGGGGCGGCGCTGGGGCTTCCCGTGCGCAGTTCTTCCCTGATTCTGGAAGGGGGGGCGATTGAGGGCAATGGGGAC GGCTTGCTGGTGACGACGGAGTCCGTGCTGCTGAATCCCAACCGCAATCCGGATTGGAGCCGGGCCATGATTGAGGAGGA ATTGAAGCGCATGCTGGGCGTCAGAGCCGTTTTCTGGCTCGGTTCCGGCATTGAAGGGGATGATACGGACGGCCATATTG ACGACATGGTGCGTTTTGTGTGCCGGGATGCCGTAGTCTCCATCGTGGAAACGGATTCTTCCTCTCCCCATTACCGCGCT CTGGCGGAGAATAATGAACGCCTTCAGGATTTGAGATGCGTGGACGGTTCCGGGGTGGAGGTGATTCCCCTGCCGATGCC GGATCCCCTCCATGCGGAGGACTGGCGCCTGGATCAGCTCCCTGCCAGTTACGCCAATTTCCTCATTGTTAATGAGGCCG TCATTGTTCCCGTATTCAACCAGCCCCGGAATGACGATCGCGCCCTGGGCATTTTGCGTGAATGTTTCAGCGGAAAACAG GTAATAGGGGTGGATGCCCGCAAGCTGGTGCTGGAAGGCGGCGCCATCCACTGCATCACCCAGCAGCAGCCTCGGCCGGG GAAGGAGGGACTGTGA
Upstream 100 bases:
>100_bases GATTCCCTGGATGATTTCAAGGGCTTCATGAGCTTCCGCAAGGCTTTTGAAGAGCCTTATGAATTTCAGGACCAGCCCAG TTGAACCGCCCGATACCGCC
Downstream 100 bases:
>100_bases GCGGAGGGGAAGGAATAACGGTGGATGTGATTCTGCCGATGGAAAAGGCCGGCAGCGAGCGCGTGCGCCGCGCTGCCGTG GCGCGGAAGCTGGGTATTTC
Product: Agmatine deiminase
Products: NA
Alternate protein names: Agmatine iminohydrolase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNKEPDVRWPAEWEPQDAVWLSWPHRRDLWQGGLDELQQTYGSVAAAIAPHALVCVNAAAPLHPGVRQAMLASGMSEEQF RLFNHPTNDVWCRDHGPVFVQDVKDGSLMLADWQFNAWGGKFAPWDLDNGVPALIGAALGLPVRSSSLILEGGAIEGNGD GLLVTTESVLLNPNRNPDWSRAMIEEELKRMLGVRAVFWLGSGIEGDDTDGHIDDMVRFVCRDAVVSIVETDSSSPHYRA LAENNERLQDLRCVDGSGVEVIPLPMPDPLHAEDWRLDQLPASYANFLIVNEAVIVPVFNQPRNDDRALGILRECFSGKQ VIGVDARKLVLEGGAIHCITQQQPRPGKEGL
Sequences:
>Translated_351_residues MNKEPDVRWPAEWEPQDAVWLSWPHRRDLWQGGLDELQQTYGSVAAAIAPHALVCVNAAAPLHPGVRQAMLASGMSEEQF RLFNHPTNDVWCRDHGPVFVQDVKDGSLMLADWQFNAWGGKFAPWDLDNGVPALIGAALGLPVRSSSLILEGGAIEGNGD GLLVTTESVLLNPNRNPDWSRAMIEEELKRMLGVRAVFWLGSGIEGDDTDGHIDDMVRFVCRDAVVSIVETDSSSPHYRA LAENNERLQDLRCVDGSGVEVIPLPMPDPLHAEDWRLDQLPASYANFLIVNEAVIVPVFNQPRNDDRALGILRECFSGKQ VIGVDARKLVLEGGAIHCITQQQPRPGKEGL >Mature_351_residues MNKEPDVRWPAEWEPQDAVWLSWPHRRDLWQGGLDELQQTYGSVAAAIAPHALVCVNAAAPLHPGVRQAMLASGMSEEQF RLFNHPTNDVWCRDHGPVFVQDVKDGSLMLADWQFNAWGGKFAPWDLDNGVPALIGAALGLPVRSSSLILEGGAIEGNGD GLLVTTESVLLNPNRNPDWSRAMIEEELKRMLGVRAVFWLGSGIEGDDTDGHIDDMVRFVCRDAVVSIVETDSSSPHYRA LAENNERLQDLRCVDGSGVEVIPLPMPDPLHAEDWRLDQLPASYANFLIVNEAVIVPVFNQPRNDDRALGILRECFSGKQ VIGVDARKLVLEGGAIHCITQQQPRPGKEGL
Specific function: Unknown
COG id: COG2957
COG function: function code E; Peptidylarginine deiminase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the agmatine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017754 - InterPro: IPR007466 [H]
Pfam domain/function: PF04371 PAD_porph [H]
EC number: =3.5.3.12 [H]
Molecular weight: Translated: 38683; Mature: 38683
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEPDVRWPAEWEPQDAVWLSWPHRRDLWQGGLDELQQTYGSVAAAIAPHALVCVNAAA CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCC PLHPGVRQAMLASGMSEEQFRLFNHPTNDVWCRDHGPVFVQDVKDGSLMLADWQFNAWGG CCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCC KFAPWDLDNGVPALIGAALGLPVRSSSLILEGGAIEGNGDGLLVTTESVLLNPNRNPDWS CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCEEECCCCEEEEEEEEEEECCCCCCCHH RAMIEEELKRMLGVRAVFWLGSGIEGDDTDGHIDDMVRFVCRDAVVSIVETDSSSPHYRA HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEH LAENNERLQDLRCVDGSGVEVIPLPMPDPLHAEDWRLDQLPASYANFLIVNEAVIVPVFN HHCCCHHHHHHEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHHHCEEEEECEEEEEECC QPRNDDRALGILRECFSGKQVIGVDARKLVLEGGAIHCITQQQPRPGKEGL CCCCCHHHHHHHHHHHCCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCC >Mature Secondary Structure MNKEPDVRWPAEWEPQDAVWLSWPHRRDLWQGGLDELQQTYGSVAAAIAPHALVCVNAAA CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCC PLHPGVRQAMLASGMSEEQFRLFNHPTNDVWCRDHGPVFVQDVKDGSLMLADWQFNAWGG CCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCC KFAPWDLDNGVPALIGAALGLPVRSSSLILEGGAIEGNGDGLLVTTESVLLNPNRNPDWS CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCEEECCCCEEEEEEEEEEECCCCCCCHH RAMIEEELKRMLGVRAVFWLGSGIEGDDTDGHIDDMVRFVCRDAVVSIVETDSSSPHYRA HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEH LAENNERLQDLRCVDGSGVEVIPLPMPDPLHAEDWRLDQLPASYANFLIVNEAVIVPVFN HHCCCHHHHHHEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHHHCEEEEECEEEEEECC QPRNDDRALGILRECFSGKQVIGVDARKLVLEGGAIHCITQQQPRPGKEGL CCCCCHHHHHHHHHHHCCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA