| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734588
Identifier: 187734588
GI number: 187734588
Start: 96370
End: 96885
Strand: Direct
Name: 187734588
Synonym: Amuc_0074
Alternate gene names: NA
Gene position: 96370-96885 (Clockwise)
Preceding gene: 187734587
Following gene: 187734590
Centisome position: 3.62
GC content: 58.33
Gene sequence:
>516_bases ATGAACAAACTCCTGCTTTCCCTGCTGGGGGCCGCCCTCCTTCCCGCCTTGACCCAGTGCAACACCCTGGAAAAAGACAT TGCCGGCATCAACGCCCGCAATGCGGAAATAGCCTGCGAACCCAGGGGAAACTACTTCGTCGGCCGCCGCTACCATGTAC CGGCAACGCGCTTCTGGGGATACCTGCGCCAGCCGGGCCAGACTTGGAGAACGGCCCAACTCGTCATCATGGATGAAAGC GCCTGCCGCACCCCGGACCGCCTGCCGGAATACACCGGAAATCCGCGCTACGCCTACGACAACAACTATGAATACAGGGT ATACGGCAAATACACGGGCAAATACGGTTACGAACCCAATTCCAATCTGAAGCTGCCCATCTTCAAACCGACCAGGTTTG AAGTGGCCAACGCCAACCCCGGCTGGCTCTTCAAACCCTCGGAAAAATATGATACCGGAGCCGTTACTCTGCGCCCTGCT ATCATGCCCGCGACAACCTCCCTCCCGGTCCGGTAA
Upstream 100 bases:
>100_bases GATTCGGCTCCGTCACCCATATCACGGGAACCTTTGGCTTCTTTGCGGCTTCCGCCGCCATTCAAATGCTCTTAAATAAG AAAAAAACACCATCGTCATC
Downstream 100 bases:
>100_bases GAAAAACCTGTCCGCAAAAACGGGCCCGGAAAGATAAAAAAGAAGAAAAAGCTTGATATTTTCATTTCTCTGCGCTAAAA ACTCTCTGCCTTAAGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNKLLLSLLGAALLPALTQCNTLEKDIAGINARNAEIACEPRGNYFVGRRYHVPATRFWGYLRQPGQTWRTAQLVIMDES ACRTPDRLPEYTGNPRYAYDNNYEYRVYGKYTGKYGYEPNSNLKLPIFKPTRFEVANANPGWLFKPSEKYDTGAVTLRPA IMPATTSLPVR
Sequences:
>Translated_171_residues MNKLLLSLLGAALLPALTQCNTLEKDIAGINARNAEIACEPRGNYFVGRRYHVPATRFWGYLRQPGQTWRTAQLVIMDES ACRTPDRLPEYTGNPRYAYDNNYEYRVYGKYTGKYGYEPNSNLKLPIFKPTRFEVANANPGWLFKPSEKYDTGAVTLRPA IMPATTSLPVR >Mature_171_residues MNKLLLSLLGAALLPALTQCNTLEKDIAGINARNAEIACEPRGNYFVGRRYHVPATRFWGYLRQPGQTWRTAQLVIMDES ACRTPDRLPEYTGNPRYAYDNNYEYRVYGKYTGKYGYEPNSNLKLPIFKPTRFEVANANPGWLFKPSEKYDTGAVTLRPA IMPATTSLPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19430; Mature: 19430
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLLSLLGAALLPALTQCNTLEKDIAGINARNAEIACEPRGNYFVGRRYHVPATRFWG CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEECEEEECCHHHHHH YLRQPGQTWRTAQLVIMDESACRTPDRLPEYTGNPRYAYDNNYEYRVYGKYTGKYGYEPN HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCC SNLKLPIFKPTRFEVANANPGWLFKPSEKYDTGAVTLRPAIMPATTSLPVR CCEEEEEECCCEEEEECCCCCEEECCCCCCCCCEEEEECEECCCCCCCCCC >Mature Secondary Structure MNKLLLSLLGAALLPALTQCNTLEKDIAGINARNAEIACEPRGNYFVGRRYHVPATRFWG CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEECEEEECCHHHHHH YLRQPGQTWRTAQLVIMDESACRTPDRLPEYTGNPRYAYDNNYEYRVYGKYTGKYGYEPN HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCC SNLKLPIFKPTRFEVANANPGWLFKPSEKYDTGAVTLRPAIMPATTSLPVR CCEEEEEECCCEEEEECCCCCEEECCCCCCCCCEEEEECEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA