| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734590
Identifier: 187734590
GI number: 187734590
Start: 98743
End: 99246
Strand: Direct
Name: 187734590
Synonym: Amuc_0076
Alternate gene names: NA
Gene position: 98743-99246 (Clockwise)
Preceding gene: 187734588
Following gene: 187734591
Centisome position: 3.71
GC content: 56.15
Gene sequence:
>504_bases ATGCAAGAAAAAAGCAGCGGCTTTCAATGGCCCGCACAGTGGACCCCCGATATTCTCGCCACGTTGATGTTCGTGGTGCA GAAAGGAAGGATTCTCCTGATACGCAAAAAGAGGGGAATCGGCGCGGGCAAGGTGAACGGCCCCGGCGGAAAGTTTGAAC CGGGGGAAACGGCCCTGCAATGCGTTTTGCGGGAAGTTCGGGAAGAGCTTCACATTGATATTGAGGATGCCCGGGAAATG GGCGTGCTGAATTTTTCCTTTGCCTGCGGCACCATTCCGGAAATCCGCTGCCACGTGTTTATGGCGACGTCTTTTACAGG CACCCCCACGGAAACCCCCGAGGCGGAGCCCTTCTGGTGTCCGGTGGACGGGATTCCCTATGACCTCATGTGGCAGGATG ACCGGTTCTGGCTGCCCGCCATGCTGGACGGGAAACGGTTTGAGGCGTTTTTCACGTTTGAGGGGGACCGAATGCTGGAA TTTTCCCTGAAAGCAGAGGATTAA
Upstream 100 bases:
>100_bases AGCTTCTTTAAGAGAATTCAACCCTTTTCAAGCATGTGTGATGGTCACAATATTCCGCATTTTTCTTCATGATTCCCTTC CCATCCTGTAATATGCGCCC
Downstream 100 bases:
>100_bases ATCGCCAAGAAACCCCAGGTTGCGGCCTCCTCCCTTTAAGCCGGATGGGGAACGCTGAACTTTTTTTATTCCGCCCTTCC CCCCGGAAGCAGCAGATTCA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: 7 8-Dihydro-8-Oxoguanine Triphosphatase; Mutator Protein MutT; Mutator MutX Protein; MutT/Nudix Family Protein; NUDIX Domain-Containing Protein; Mutator MutT Protein; Mutator MutT; MutT Family Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MQEKSSGFQWPAQWTPDILATLMFVVQKGRILLIRKKRGIGAGKVNGPGGKFEPGETALQCVLREVREELHIDIEDAREM GVLNFSFACGTIPEIRCHVFMATSFTGTPTETPEAEPFWCPVDGIPYDLMWQDDRFWLPAMLDGKRFEAFFTFEGDRMLE FSLKAED
Sequences:
>Translated_167_residues MQEKSSGFQWPAQWTPDILATLMFVVQKGRILLIRKKRGIGAGKVNGPGGKFEPGETALQCVLREVREELHIDIEDAREM GVLNFSFACGTIPEIRCHVFMATSFTGTPTETPEAEPFWCPVDGIPYDLMWQDDRFWLPAMLDGKRFEAFFTFEGDRMLE FSLKAED >Mature_167_residues MQEKSSGFQWPAQWTPDILATLMFVVQKGRILLIRKKRGIGAGKVNGPGGKFEPGETALQCVLREVREELHIDIEDAREM GVLNFSFACGTIPEIRCHVFMATSFTGTPTETPEAEPFWCPVDGIPYDLMWQDDRFWLPAMLDGKRFEAFFTFEGDRMLE FSLKAED
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40288286, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=3e-26, Organism=Homo sapiens, GI40288282, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=3e-26, Organism=Homo sapiens, GI40288278, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=3e-26, Organism=Homo sapiens, GI40288284, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=4e-26, Organism=Homo sapiens, GI40288280, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=4e-26, Organism=Homo sapiens, GI40288276, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=4e-26, Organism=Homo sapiens, GI40288274, Length=150, Percent_Identity=40.6666666666667, Blast_Score=114, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19014; Mature: 19014
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKSSGFQWPAQWTPDILATLMFVVQKGRILLIRKKRGIGAGKVNGPGGKFEPGETALQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH CVLREVREELHIDIEDAREMGVLNFSFACGTIPEIRCHVFMATSFTGTPTETPEAEPFWC HHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEE PVDGIPYDLMWQDDRFWLPAMLDGKRFEAFFTFEGDRMLEFSLKAED CCCCCCEEEEECCCCEECCEEECCCEEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure MQEKSSGFQWPAQWTPDILATLMFVVQKGRILLIRKKRGIGAGKVNGPGGKFEPGETALQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH CVLREVREELHIDIEDAREMGVLNFSFACGTIPEIRCHVFMATSFTGTPTETPEAEPFWC HHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEE PVDGIPYDLMWQDDRFWLPAMLDGKRFEAFFTFEGDRMLEFSLKAED CCCCCCEEEEECCCCEECCEEECCCEEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA