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The map label for this gene is yaaJ [C]

Identifier: 187734556

GI number: 187734556

Start: 55485

End: 56894

Strand: Direct

Name: yaaJ [C]

Synonym: Amuc_0040

Alternate gene names: 187734556

Gene position: 55485-56894 (Clockwise)

Preceding gene: 187734554

Following gene: 187734557

Centisome position: 2.08

GC content: 59.01

Gene sequence:

>1410_bases
ATGCTTGACGCCCTCCAAAATGCCTTTTTCCAGACCGGGGACACGCTCACATCCTGGCTGTCCGCTTTCAGCAGCTTCCT
GTGGGGATGGCCCCTGCTCATCATGCTGCTGGGCACGCACCTGTACCTCACCGCCATCCTGCGGTTTCCGCAGCGTTATC
TGCTTAAGGCCCTGAAATTGTATTTTGTGAAAGATCATACGGACAAGGGAGATATCTCCCCGTTCAGCTCCCTGATGGTG
GCCCTGGCAGCCAACATCGGCGCCGGGAATATCATCGGCGTGGGCGTGGCGATTGCAGCCGGAGGCCCCGGCGCCGTCTT
TTGGTGCTGGCTGACGGGAGTTCTGGGAATGGCAACCCGTTATTCGGAAGGATTGCTCGCCATCAAATACCGGGTGGAAA
ACAAGGACGGCAATATGAGCGGAGGCCCCATGTTCGTGCTGGAACGCGGTCTGAACAGCAAATGGCTGGGGGCAGCCTTC
GCCGTCTTCACGGCCATTGCCGCCTTCGGGATCGGCAATCTGACGCAAGGGAACGCAGCGGCGGAACAGCTCCACCACGC
CTTTTCCATTCCCTCCTGGGGAACAGCCGCCGTTCTGACGGCATTGACGGCTCTGGTGATGCTGGGAGGCATCCAGGGCA
TTGCCAGGGTATGCGCTTTCTTCGTGCCGTTCATGGCCGTCATCTATATCATGGGATGCCTGTATATCCTGACCGTACAG
GCAGAGTATATTATTCCCGCCATCCGGTATATTCTGGACTGCGCCTTCACGGGAGAAGCCGCCGCCGGGGGCGCAGCAGG
AGCGGCCGTCATGGCGGCAATGAGAACCGGTGTGGCCCGGGGCCTCTTTTCCAATGAGGCCGGCCTGGGATCCGCAGCCA
TCGCCTCCGCCGCAGCGCAGAACCGCAACCCCGTCAGGCAGGCGCTCATCTCTTCCAGCGGCCCCTTCTGGGATACCGTC
ATTATCTGCGCCCTGACGGGAATTGTGCTGACCACCAGCATCATCGCGCATCCGGACATTTCCTGCACGGACGGCCCCAG
GCTTACTACGCTGGCATTCAGCAAAATTCCTTACATAGGCTCCCCTCTGCTCACGCTCAGCCTGGTTACGTTTGTAGTTT
CCACCATTCTGGGCTGGTCCTACTTCGGAGAAAAAGCGCTGGAATACCTGGGAGGCATCCGGCTGATCATGCCTTACCGC
GTCATCTGGGTGGCGGCGGTCTTCATCGGCTGCGTCTCTAAAATAGAACTGGTATGGATTTTTGCAGACTGCGCCAACGG
CCTGATGGCCCTGCCCAACCTCATTTCCCTGCTGGCACTTTCCGGCGTGCTTGTCCAGCAAACGCGGTACTACCTCTGGC
AGCACAGGCTGGACGATTACGACGAATCCCACATACCGGAAGGAAAATAA

Upstream 100 bases:

>100_bases
GGAAAACTCCGGGCCCAGGCTCATGACATTGTGAAAAACCTTTCTCCGTCATTTGTTTAAGGACTTGTCACCACGCTTCT
TTTCCCTAGAATCCCCCGGT

Downstream 100 bases:

>100_bases
CGATTTTTTTAACTCGGATTCAAATAATTCTTGCCTTTCGGCTTCCGGTAGTATTTACTTCGCCGCGCAGTCCCTGCAAA
CCTAAAAGTCGCGTTCGTCT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MLDALQNAFFQTGDTLTSWLSAFSSFLWGWPLLIMLLGTHLYLTAILRFPQRYLLKALKLYFVKDHTDKGDISPFSSLMV
ALAANIGAGNIIGVGVAIAAGGPGAVFWCWLTGVLGMATRYSEGLLAIKYRVENKDGNMSGGPMFVLERGLNSKWLGAAF
AVFTAIAAFGIGNLTQGNAAAEQLHHAFSIPSWGTAAVLTALTALVMLGGIQGIARVCAFFVPFMAVIYIMGCLYILTVQ
AEYIIPAIRYILDCAFTGEAAAGGAAGAAVMAAMRTGVARGLFSNEAGLGSAAIASAAAQNRNPVRQALISSSGPFWDTV
IICALTGIVLTTSIIAHPDISCTDGPRLTTLAFSKIPYIGSPLLTLSLVTFVVSTILGWSYFGEKALEYLGGIRLIMPYR
VIWVAAVFIGCVSKIELVWIFADCANGLMALPNLISLLALSGVLVQQTRYYLWQHRLDDYDESHIPEGK

Sequences:

>Translated_469_residues
MLDALQNAFFQTGDTLTSWLSAFSSFLWGWPLLIMLLGTHLYLTAILRFPQRYLLKALKLYFVKDHTDKGDISPFSSLMV
ALAANIGAGNIIGVGVAIAAGGPGAVFWCWLTGVLGMATRYSEGLLAIKYRVENKDGNMSGGPMFVLERGLNSKWLGAAF
AVFTAIAAFGIGNLTQGNAAAEQLHHAFSIPSWGTAAVLTALTALVMLGGIQGIARVCAFFVPFMAVIYIMGCLYILTVQ
AEYIIPAIRYILDCAFTGEAAAGGAAGAAVMAAMRTGVARGLFSNEAGLGSAAIASAAAQNRNPVRQALISSSGPFWDTV
IICALTGIVLTTSIIAHPDISCTDGPRLTTLAFSKIPYIGSPLLTLSLVTFVVSTILGWSYFGEKALEYLGGIRLIMPYR
VIWVAAVFIGCVSKIELVWIFADCANGLMALPNLISLLALSGVLVQQTRYYLWQHRLDDYDESHIPEGK
>Mature_469_residues
MLDALQNAFFQTGDTLTSWLSAFSSFLWGWPLLIMLLGTHLYLTAILRFPQRYLLKALKLYFVKDHTDKGDISPFSSLMV
ALAANIGAGNIIGVGVAIAAGGPGAVFWCWLTGVLGMATRYSEGLLAIKYRVENKDGNMSGGPMFVLERGLNSKWLGAAF
AVFTAIAAFGIGNLTQGNAAAEQLHHAFSIPSWGTAAVLTALTALVMLGGIQGIARVCAFFVPFMAVIYIMGCLYILTVQ
AEYIIPAIRYILDCAFTGEAAAGGAAGAAVMAAMRTGVARGLFSNEAGLGSAAIASAAAQNRNPVRQALISSSGPFWDTV
IICALTGIVLTTSIIAHPDISCTDGPRLTTLAFSKIPYIGSPLLTLSLVTFVVSTILGWSYFGEKALEYLGGIRLIMPYR
VIWVAAVFIGCVSKIELVWIFADCANGLMALPNLISLLALSGVLVQQTRYYLWQHRLDDYDESHIPEGK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=461, Percent_Identity=33.4056399132321, Blast_Score=205, Evalue=7e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50106; Mature: 50106

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALQNAFFQTGDTLTSWLSAFSSFLWGWPLLIMLLGTHLYLTAILRFPQRYLLKALKL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YFVKDHTDKGDISPFSSLMVALAANIGAGNIIGVGVAIAAGGPGAVFWCWLTGVLGMATR
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHEEEECCCCCHHHHHHHHHHHHHHHH
YSEGLLAIKYRVENKDGNMSGGPMFVLERGLNSKWLGAAFAVFTAIAAFGIGNLTQGNAA
HCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
AEQLHHAFSIPSWGTAAVLTALTALVMLGGIQGIARVCAFFVPFMAVIYIMGCLYILTVQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEYIIPAIRYILDCAFTGEAAAGGAAGAAVMAAMRTGVARGLFSNEAGLGSAAIASAAAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NRNPVRQALISSSGPFWDTVIICALTGIVLTTSIIAHPDISCTDGPRLTTLAFSKIPYIG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCCC
SPLLTLSLVTFVVSTILGWSYFGEKALEYLGGIRLIMPYRVIWVAAVFIGCVSKIELVWI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
FADCANGLMALPNLISLLALSGVLVQQTRYYLWQHRLDDYDESHIPEGK
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLDALQNAFFQTGDTLTSWLSAFSSFLWGWPLLIMLLGTHLYLTAILRFPQRYLLKALKL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YFVKDHTDKGDISPFSSLMVALAANIGAGNIIGVGVAIAAGGPGAVFWCWLTGVLGMATR
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHEEEECCCCCHHHHHHHHHHHHHHHH
YSEGLLAIKYRVENKDGNMSGGPMFVLERGLNSKWLGAAFAVFTAIAAFGIGNLTQGNAA
HCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
AEQLHHAFSIPSWGTAAVLTALTALVMLGGIQGIARVCAFFVPFMAVIYIMGCLYILTVQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEYIIPAIRYILDCAFTGEAAAGGAAGAAVMAAMRTGVARGLFSNEAGLGSAAIASAAAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NRNPVRQALISSSGPFWDTVIICALTGIVLTTSIIAHPDISCTDGPRLTTLAFSKIPYIG
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCCCC
SPLLTLSLVTFVVSTILGWSYFGEKALEYLGGIRLIMPYRVIWVAAVFIGCVSKIELVWI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
FADCANGLMALPNLISLLALSGVLVQQTRYYLWQHRLDDYDESHIPEGK
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]