Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yrbH [C]

Identifier: 187733808

GI number: 187733808

Start: 2854340

End: 2854504

Strand: Direct

Name: yrbH [C]

Synonym: SbBS512_E3052

Alternate gene names: 187733808

Gene position: 2854340-2854504 (Clockwise)

Preceding gene: 187732336

Following gene: 187733261

Centisome position: 61.84

GC content: 43.64

Gene sequence:

>165_bases
TTGGAGTCATTACCTTTAGGTTTAGCACCGTCATGCTCGTCTACTGTTGTTCTGGTTGTTGGTGATGCGGTGGCGCTTGC
ACTCTCTGAATTGAAAAAATTTACTCGTGCTGATTTCGGCTTATATCATCCAGGAGGTGCACTCGGCATTAAAGCAAATT
CATAA

Upstream 100 bases:

>100_bases
CTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAA
CATAAAACACTATCAGTAAG

Downstream 100 bases:

>100_bases
TTTCAAAGTATAAATACAGTAACCGGTCACGCCATCTTTTGGGGTGGCGTTCATTGAAGTGAGTGTCAGCTATGAAAAAT
GTTCTGGTCACCGTCCCCAG

Product: phosphosugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS

Sequences:

>Translated_54_residues
MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS
>Mature_54_residues
MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789588, Length=50, Percent_Identity=60, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5473; Mature: 5473

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC
>Mature Secondary Structure
MESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALGIKANS
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA