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The map label for this gene is fimI [H]

Identifier: 187732280

GI number: 187732280

Start: 4474834

End: 4475331

Strand: Reverse

Name: fimI [H]

Synonym: SbBS512_E4804

Alternate gene names: 187732280

Gene position: 4475331-4474834 (Counterclockwise)

Preceding gene: 187732432

Following gene: 187731902

Centisome position: 96.95

GC content: 50.4

Gene sequence:

>498_bases
ATGTTTGCTCTGGCCGGAAATAAATGGAATACCACGCTGCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGA
AACTTGCCGGATTGAAGCCGGTGATAAACAAATGACGGTCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGTAG
GGGAAGATAGCGCACCGGTGCCTTTTGTTATTCATTTACGGGAATGTAGCACGGTGGTGAGTGAACGTGTGGGTGTGGCG
TTTCACGGTGTCGCGGATGGTAAAAATCCGGATGTGCTTTCCGTGGGAGAGGGGCCAGGGATAGCCACCAATATTGGCGT
AGCGTTGTTTGATGATGAAGGAAACCTCGTACCGATTAATCGTCCTCCAGTAAACTGGAAACGGCTTTACTCAGGCTCTA
CTTCGCTACATTTCATCGCCAAATATCGTGCTACCGGGCGTTGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTC
TCTTTAACCTATCAGTAA

Upstream 100 bases:

>100_bases
AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATC
ACCTAGCGTCGTTGCTGCCA

Downstream 100 bases:

>100_bases
TTGTTCAGCAGATAATGTGATAACAGGAACAGGACAGTGAGTAATAAAAACGCCAATGTAAGGAAATCGCAGGAAATAAC
ATTCTGCTTGCTGGCAGGTA

Product: type-1 fimbrial-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVA
FHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWF
SLTYQ

Sequences:

>Translated_165_residues
MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVA
FHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWF
SLTYQ
>Mature_165_residues
MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVA
FHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWF
SLTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=165, Percent_Identity=98.7878787878788, Blast_Score=338, Evalue=1e-94,
Organism=Escherichia coli, GI87081805, Length=167, Percent_Identity=32.3353293413174, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI87081753, Length=164, Percent_Identity=31.7073170731707, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1790773, Length=151, Percent_Identity=32.4503311258278, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1790769, Length=154, Percent_Identity=33.7662337662338, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787781, Length=158, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081804, Length=153, Percent_Identity=24.8366013071895, Blast_Score=60, Evalue=7e-11,
Organism=Escherichia coli, GI1789422, Length=157, Percent_Identity=26.1146496815287, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17763; Mature: 17763

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPV
CEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCCC
PFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPIN
CEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECEEEEECCCCCEEECC
RPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWFSLTYQ
CCCCCCEEEECCCCCEEEEEEEECCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPV
CEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCCC
PFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPIN
CEEEEEHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCEEEECEEEEECCCCCEEECC
RPPVNWKRLYSGSTSLHFIAKYRATGRWVTGGIANAQAWFSLTYQ
CCCCCCEEEECCCCCEEEEEEEECCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 6147250 [H]