| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732432
Identifier: 187732432
GI number: 187732432
Start: 4483024
End: 4483854
Strand: Reverse
Name: 187732432
Synonym: SbBS512_E4811
Alternate gene names: NA
Gene position: 4483854-4483024 (Counterclockwise)
Preceding gene: 187732744
Following gene: 187732280
Centisome position: 97.14
GC content: 35.14
Gene sequence:
>831_bases TTGTTTGTTGAATGGAAACCTGAACTTGAAGAGGCTGATATTAGTGATTCTGTGATTCATAAAAAAATCCCGGTAAAATA TGTTCAGGCACCATCCTATAAAGAAATATTTGAGGTGCTGAGTGAAACTAAAAAAAGGATTCCAGCACATTTATTCCGAA TGATAAAAGATGAACTTTATGAGTTGGTCTTAACTGATGATCCGAAAGGAAAATTATATGTGAGGGATTCAGAGAAAATT GAAGAAGGGGTCAGTACAACTGAGTTTGTTGTGGGATATGGTGCTATTTCGATGGTAAAAAAATCGGAATCGATGGCAAC TAAAGGATTGGTTGGACTGGAGCGTGTAGATCTCATCCGAGAGGTTGTATTTGAAAATGGATATTATGATTGGGGATGTG TTGTTAATGATGTTTTGCCAAATATATGCAAAGGCAATGTGCGCATTCCTATTTTTCACTTCTTAAATCACGCTAAATTA ATTAATCCTGATGGGAGTATAATTAATGAAACAGAACTCTCAGGTGGCGTTTTATCACGATTAAATATCACTCCTATTAG TTTTCAGTCTCAAGGATGGGATAAACGACGCTCTGAAACCGTTCCTGAGGTCAAGGTGGGGGTCAATGAGTTATATCTTG CTTATGATTTCAGTTTCTTTTTAAGAATGATGCCTTATATGGAGCCTGGATTAATCAAGCGCGATATGGGTGAGCTTCTC AAAATATTGAAAAAATATATAGATGAAGCTATGAATACTCAGGTATTGTCAAGTAATTTTTGCAAATTAGTGTGTATTTA TGATTATATCAAAAATAGTCACAGGTATTAA
Upstream 100 bases:
>100_bases AATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCTGG ATTTTGTACAGAATAAATTA
Downstream 100 bases:
>100_bases GTAAGATATAACCTTCTTAGGGGGCGAGATAGTAAAAAAAGGCGTTACCTAAGAGTGACGCCTTAATTTCCTAAAATATC TTAATATAATAAATTAATGT
Product: putative phage-related protein
Products: NA
Alternate protein names: Phage-Related Protein
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MFVEWKPELEEADISDSVIHKKIPVKYVQAPSYKEIFEVLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKI EEGVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLPNICKGNVRIPIFHFLNHAKL INPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRSETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELL KILKKYIDEAMNTQVLSSNFCKLVCIYDYIKNSHRY
Sequences:
>Translated_276_residues MFVEWKPELEEADISDSVIHKKIPVKYVQAPSYKEIFEVLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKI EEGVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLPNICKGNVRIPIFHFLNHAKL INPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRSETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELL KILKKYIDEAMNTQVLSSNFCKLVCIYDYIKNSHRY >Mature_276_residues MFVEWKPELEEADISDSVIHKKIPVKYVQAPSYKEIFEVLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKI EEGVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLPNICKGNVRIPIFHFLNHAKL INPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRSETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELL KILKKYIDEAMNTQVLSSNFCKLVCIYDYIKNSHRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31800; Mature: 31800
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVEWKPELEEADISDSVIHKKIPVKYVQAPSYKEIFEVLSETKKRIPAHLFRMIKDELY CCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVLTDDPKGKLYVRDSEKIEEGVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIR HHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVVFENGYYDWGCVVNDVLPNICKGNVRIPIFHFLNHAKLINPDGSIINETELSGGVLSR HHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCEEECCCCCEECCCCCCCCHHHH LNITPISFQSQGWDKRRSETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELL EECCEECCCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KILKKYIDEAMNTQVLSSNFCKLVCIYDYIKNSHRY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MFVEWKPELEEADISDSVIHKKIPVKYVQAPSYKEIFEVLSETKKRIPAHLFRMIKDELY CCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVLTDDPKGKLYVRDSEKIEEGVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIR HHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVVFENGYYDWGCVVNDVLPNICKGNVRIPIFHFLNHAKLINPDGSIINETELSGGVLSR HHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCEEECCCCCEECCCCCCCCHHHH LNITPISFQSQGWDKRRSETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELL EECCEECCCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KILKKYIDEAMNTQVLSSNFCKLVCIYDYIKNSHRY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA