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The map label for this gene is fimC [H]

Identifier: 187731902

GI number: 187731902

Start: 4474561

End: 4474797

Strand: Reverse

Name: fimC [H]

Synonym: SbBS512_E4802

Alternate gene names: 187731902

Gene position: 4474797-4474561 (Counterclockwise)

Preceding gene: 187732280

Following gene: 187732575

Centisome position: 96.94

GC content: 44.3

Gene sequence:

>237_bases
GTGAGTAATAAAAACGCCAATGTAAGGAAATCGCAGGAAATAACATTCTGCTTGCTGGCAGGTATCCTGATGTTCATGGC
AATGATGGTTGCCGGACGCGCTGAAGCGGGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCGGCAGGGCAAAAACAAG
TGCAACTTGCCGTGACAAATAATGATGAAAATAGTACCTATTTAATTCAATCATGGGTAATGACTCCAACTTACTGA

Upstream 100 bases:

>100_bases
CGGGCGTTGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAATTGTTCAGCAGATAAT
GTGATAACAGGAACAGGACA

Downstream 100 bases:

>100_bases
TAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCC
CAGCCTTGCCAGATGTTGTC

Product: chaperone protein FimC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVMTPTY

Sequences:

>Translated_78_residues
MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVMTPTY
>Mature_77_residues
SNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVMTPTY

Specific function: Required for the biogenesis of type 1 fimbriae. Binds and interact with fimH [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1790771, Length=73, Percent_Identity=97.2602739726027, Blast_Score=148, Evalue=8e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 8530; Mature: 8399

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCEEEEEEEC
NDENSTYLIQSWVMTPTY
CCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
SNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCEEEEEEEC
NDENSTYLIQSWVMTPTY
CCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]