Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477792

Identifier: 186477792

GI number: 186477792

Start: 3423319

End: 3424533

Strand: Reverse

Name: 186477792

Synonym: Bphy_3047

Alternate gene names: NA

Gene position: 3424533-3423319 (Counterclockwise)

Preceding gene: 186477793

Following gene: 186477791

Centisome position: 98.43

GC content: 60.58

Gene sequence:

>1215_bases
ATGAAAAGGAAGACACTCGCGCGGTTCGCATCCATTTGCTTTGCGGCCGCTGCAAGCGTCGCACTCACTGCGGGCAGCGC
GCAAGCCGCCGACGATGCAGTGAAGATCGGTTTCATCACGGACATGTCGGGTCTCTATGCCGACATCGACGGACAGGGCG
GTCTCGAAGCGATCCGCATGGCAGTCGCCGATTTCGGCGGCAAGGTCAACGGCAAGCCGATCCAGGTCGTCTATGCGGAC
CACCAGAACAAGGCGGATATCGCGGCGTCGCGCGCGCGTGAATGGTTCGACCGCGATGGCGTCGACATGCTGGTGGGCGG
CACGAACTCGGCAACGGGCCTGTCGATGAACCAGGTTGCGGGCGAAAAGCACAAGGTCTACATCAGTATCGGCGCAGGCG
CCGATACGCTCACCAACGAGCAATGCACGCCGTACACCATCCACTATGCGTATGACACGACGGCGCTCGCTAAAGGCACG
GGCTCGGCCGTGACGAAGCAGGGCGGCAAGACGTGGTACTTCCTGACGGCTGACTACGCGTTCGGCAAGGCGCTGGAGAA
GAACACGGCTGACGTCGTCAAGGCGAACGGCGGTCAGGTGCTGGGCGAGGTGCGTCACCCGCTATCGGCCTCGGACTTCT
CGTCGTTCCTGTTGCAGGCGCAAGCATCGAAGGCGCAGATTCTCGGCCTCGCCAATGCGGGCGGCGACACGATCAACTCG
ATCAAGGCCGCGAAGGAATTCGGCGTGACAAAGACGATGAAGCTCGCCGCGCTGCTCGTCTTCATCAACGATATCCACAG
TCTTGGCCTCGAGACGACGCAAAACCTCGTGCTGACTGACAGCTGGTACTGGAACAAGGACGCCACGACGCGCAAGTGGT
CGCAGCGCTACTTCGACAAGATGAGGAAGATGCCGTCGAGCCTGCAGGCGGCCGACTACTCGGCGACCATGACGTACCTG
AAGGCCGTGCAGACGGTTGGCTCGACGGATGCCGACAAGGTGATGGCGCAACTCAAGAAGCAGAAAATCGACGACTTCTT
CGCGAAGGGCTACATCCGCCAGGACGGCAGCATGATCCATGACATGTACCTGATGCAGGTGAAGACGCCGGCTGAGTCGA
AAGAGCCGTGGGACTACTACAAGATCACCGCTACGATTCCTGGCGAACAGGCTTTTACGACCAAGCAGGAAACGCGCTGC
GCGCTGTGGAAATAA

Upstream 100 bases:

>100_bases
AAGCAAAATGCCGGTGCTGCACGATTTGCTCGGGGTATGAGCCGGGGAGTGCGTACCTGATTGCCTCTGACAACCACAAC
GCAGAACGAAGGAGACAGTA

Downstream 100 bases:

>100_bases
GCGGCGCCGAGGATCGCTTGCCGGTTCGTCTGGAATAGACACGGCGGGCGTCGATGTTCTGCGTGCTGGACGTGTCGGGC
CATCGCCGGCCTGACACGTG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKRKTLARFASICFAAAASVALTAGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPIQVVYAD
HQNKADIAASRAREWFDRDGVDMLVGGTNSATGLSMNQVAGEKHKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGT
GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGEVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS
IKAAKEFGVTKTMKLAALLVFINDIHSLGLETTQNLVLTDSWYWNKDATTRKWSQRYFDKMRKMPSSLQAADYSATMTYL
KAVQTVGSTDADKVMAQLKKQKIDDFFAKGYIRQDGSMIHDMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKQETRC
ALWK

Sequences:

>Translated_404_residues
MKRKTLARFASICFAAAASVALTAGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPIQVVYAD
HQNKADIAASRAREWFDRDGVDMLVGGTNSATGLSMNQVAGEKHKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGT
GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGEVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS
IKAAKEFGVTKTMKLAALLVFINDIHSLGLETTQNLVLTDSWYWNKDATTRKWSQRYFDKMRKMPSSLQAADYSATMTYL
KAVQTVGSTDADKVMAQLKKQKIDDFFAKGYIRQDGSMIHDMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKQETRC
ALWK
>Mature_404_residues
MKRKTLARFASICFAAAASVALTAGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPIQVVYAD
HQNKADIAASRAREWFDRDGVDMLVGGTNSATGLSMNQVAGEKHKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGT
GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGEVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS
IKAAKEFGVTKTMKLAALLVFINDIHSLGLETTQNLVLTDSWYWNKDATTRKWSQRYFDKMRKMPSSLQAADYSATMTYL
KAVQTVGSTDADKVMAQLKKQKIDDFFAKGYIRQDGSMIHDMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKQETRC
ALWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43840; Mature: 43840

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTLARFASICFAAAASVALTAGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRM
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHH
AVADFGGKVNGKPIQVVYADHQNKADIAASRAREWFDRDGVDMLVGGTNSATGLSMNQVA
HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHC
GEKHKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGTGSAVTKQGGKTWYFLTADYA
CCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHCCCCCEEEEEEECCH
FGKALEKNTADVVKANGGQVLGEVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS
HHHHHHCCCHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH
IKAAKEFGVTKTMKLAALLVFINDIHSLGLETTQNLVLTDSWYWNKDATTRKWSQRYFDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHH
MRKMPSSLQAADYSATMTYLKAVQTVGSTDADKVMAQLKKQKIDDFFAKGYIRQDGSMIH
HHCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCEEE
DMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKQETRCALWK
EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHCHHCCCC
>Mature Secondary Structure
MKRKTLARFASICFAAAASVALTAGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRM
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHH
AVADFGGKVNGKPIQVVYADHQNKADIAASRAREWFDRDGVDMLVGGTNSATGLSMNQVA
HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHC
GEKHKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGTGSAVTKQGGKTWYFLTADYA
CCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHCCCCCEEEEEEECCH
FGKALEKNTADVVKANGGQVLGEVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS
HHHHHHCCCHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH
IKAAKEFGVTKTMKLAALLVFINDIHSLGLETTQNLVLTDSWYWNKDATTRKWSQRYFDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHH
MRKMPSSLQAADYSATMTYLKAVQTVGSTDADKVMAQLKKQKIDDFFAKGYIRQDGSMIH
HHCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCEEE
DMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKQETRCALWK
EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA