Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477752

Identifier: 186477752

GI number: 186477752

Start: 3372167

End: 3374212

Strand: Reverse

Name: 186477752

Synonym: Bphy_3006

Alternate gene names: NA

Gene position: 3374212-3372167 (Counterclockwise)

Preceding gene: 186477753

Following gene: 186477746

Centisome position: 96.98

GC content: 62.02

Gene sequence:

>2046_bases
ATGAAACAGAAGGCCATTATCAGTCTGCTGTGGGGCAAGCATTTCGGCGCGCTCCAGCAGTTTCTGCAGATGCACGAACC
GATGACGGTGATCGCGTCGCTGCCTTCGCTTTCGCCGCAGATGCAGGCCGCGATCGCGGAAACGGGTTGCACGCTCGTTT
CGCTCGACGGTTTCGCGCAGGATGCGGGCGCGCAGCAGACGGTGAGCGAAGAGACGCAGCGCCTGTTGAGCACGTTCGAA
CGCCACATTCAGCAGCAGCCGGAGTTGTGCGGCTTCACTGCCGAAGCTTCCGACAAGCTTCGTCCCATCGTGTTCGAAAG
CGTGCGGGGCGATCTGCCCGCCACCGTGCAGTTGCTCGAGTGCCTGAAGCGCGCGGCCGAGCAATACGACATCGCCCTGC
TGGCGACCAACGAGGACATGATGCGTGCCGGCAAGACGGCGACGGCATGGGCTCGCGCCAAAGGCATTCCGACCGTGCAT
CTCGCCCATTCGATCGCGCTCATCGATCCATACACCGTGCACAATGAACTGATCGCCGACAAGCTCGTCGTGTACGGTCA
GCGCGGCATGGAAGGCTATCGCGATCTGGGTGTCGCCGTGGACAGGCTGATCGCCGCGGGCAATCCGGCGTGGGATTGCT
ATGCGACGCTGCGCAAGCAGAAGCCGGCGTGCCGTGCGCAACTCAACACGAAATACGGGCTCAAAGCGGAGTTGCCGCTC
ATCGTGTTCGGCACGACATGGGCCGCGAATCTGAGCGCACACTGCATCGAAGACATTTACGACGCGTCGGTGCGCGCGTT
CATGGGCGCATGCGAAAGCTTGAAGAAGGCGGGCGTGCGGTTCAATGCGGTAATCAAGGATCGCCCGTCGAATGCGGCGT
TTGGCTCGACCCGTTGCGCAGAAATTCTGATGAAGCTGGGTGCGGCGGCCGACGGCTATTTCTACGCCAGCGACGACACT
GAACTTTTCGCCGCGGGCGCCGACGTACTGGTCGCCGTCGATTCGAACTATCTGGTCGAAGGCATGCTCGCGCACACGCC
CGTCGTCAATCTGATGAACACGGCGGGTATGCTGATGGGCCCGTGTTTCGAAGCGGAAACGGGCGTGGTGGAAGTCGAGG
CGCATGAGCTCGCGTCGGCGCTCCACCAGATCCTGACGGATCACGCGTTGCGCGCCGGTCTGGTGCAACTGGGTCAGAAA
CGCGCCGCGCACTATAACCATAACGACGGCGACGGCATGGCGTCGGTGCGCGTCGCGCAGGCACTCGCCAGCGCCGCCGC
GGGACTTGCGCCGCGCGGCCAGCGCTACGTATGGCAGCAGTATCTGGACGTCGAGTCGGGCGAGATCGCCGAGGGCTATC
ACACGCCGGGCCGGCCGAATCTGGTCGCGATGTATTCGAACAATCCTTCCACCGTGATCGATATCGGCTGCGCGGCGGGC
AGCACGGCCGCGCTGATCAAGCAGCGTTTTCCGTCGAGCCGGGTGTGGGGCATCGAGATGAACCGCGCTGCCGCACAAGT
GGCGAGCAGCAAGATCGACCGGGTGCTGGTCGGCAAGTTCGAAGATTTCGACCTCGAGCGCGAAGGCATCGCGAAGGGCA
CGCTCGACGGCGTACTGCTCGCCGATGTGCTCGAACACATGTACAACCCGTGGGACGTGATGGTGAAACTACGGCCGTAC
ATGTCGCCGACGGGCCAGCTCGTTTTGAGCATTCCCAACGTGCGCAACCTGATGTTGATGGACGATCTGAGCAAGGGCAA
ATGGACCTATGCTGCCGCTGGCCTGCTCGACATCACGCATATCCGCTTCTTTACGCTGAGCGAGATCGTGAAGTTCTGCA
ACGAGACCGGTTACAGGATCGTGCGCGCCGAGCACGCGATCGACGGCAGGCTGCGCGAGTTCTGGAATCAGAACCAGTCG
AATACGACGCCGACCGAGATCAACATGGACAGGATAAAGCTCAAGGACGTCACGCGCGACGAACTGCTCGAGCTGTGTAC
CATCCAGTTTCATCTGCTGCTCGAGAAAGATCCGCTGCACGGCTGA

Upstream 100 bases:

>100_bases
ACAAATACAAGGAAGGCACCGACGTGACCGTCGGAGCGGAGTACAACCTGGTGCGGGTGCTGCTGTCCCGATACTTCGGC
ATTTTCAGTGAGGGCCAGCG

Downstream 100 bases:

>100_bases
CGGGTGCCGTCGCGATGCAAAGAAAAAACCCGGTGACGAGTCGATCGTCACCGGGTTTTGTCATGTCTGCTGTTGCATCG
GTCCACTGAGCGGCGGACGC

Product: type 12 methyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; O-Antigen Biosynthesis Protein; SAM-Dependent O-Methyltransferase; Glycosyltransferase; Methionine Biosynthesis Protein MetW; Methyltransferase; SAM-Dependent Methyltransferase; Bifunctional SAM-Dependent Methyltransferase Type; Methyltransferase Family Protein; Glycosyl Transferase; Methylase

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE
RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH
LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL
IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT
ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK
RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG
STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY
MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS
NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG

Sequences:

>Translated_681_residues
MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE
RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH
LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL
IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT
ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK
RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG
STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY
MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS
NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG
>Mature_681_residues
MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQDAGAQQTVSEETQRLLSTFE
RHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLECLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVH
LAHSIALIDPYTVHNELIADKLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL
IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCAEILMKLGAAADGYFYASDDT
ELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMGPCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQK
RAAHYNHNDGDGMASVRVAQALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG
STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLLADVLEHMYNPWDVMVKLRPY
MSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITHIRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQS
NTTPTEINMDRIKLKDVTRDELLELCTIQFHLLLEKDPLHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74651; Mature: 74651

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCC
DAGAQQTVSEETQRLLSTFERHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
CLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVHLAHSIALIDPYTVHNELIAD
HHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHCCCCEEEHHHEEEEECCHHHHHHHHHH
KLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCE
IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCA
EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH
EILMKLGAAADGYFYASDDTELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMG
HHHHHHCCCCCCEEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
PCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQKRAAHYNHNDGDGMASVRVAQ
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG
HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC
STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLL
CHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHCCCCCCHHHHHH
ADVLEHMYNPWDVMVKLRPYMSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITH
HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEHHHHHHHHH
IRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQSNTTPTEINMDRIKLKDVTRD
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCHH
ELLELCTIQFHLLLEKDPLHG
HHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure
MKQKAIISLLWGKHFGALQQFLQMHEPMTVIASLPSLSPQMQAAIAETGCTLVSLDGFAQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCC
DAGAQQTVSEETQRLLSTFERHIQQQPELCGFTAEASDKLRPIVFESVRGDLPATVQLLE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
CLKRAAEQYDIALLATNEDMMRAGKTATAWARAKGIPTVHLAHSIALIDPYTVHNELIAD
HHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHCCCCEEEHHHEEEEECCHHHHHHHHHH
KLVVYGQRGMEGYRDLGVAVDRLIAAGNPAWDCYATLRKQKPACRAQLNTKYGLKAELPL
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCE
IVFGTTWAANLSAHCIEDIYDASVRAFMGACESLKKAGVRFNAVIKDRPSNAAFGSTRCA
EEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHH
EILMKLGAAADGYFYASDDTELFAAGADVLVAVDSNYLVEGMLAHTPVVNLMNTAGMLMG
HHHHHHCCCCCCEEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
PCFEAETGVVEVEAHELASALHQILTDHALRAGLVQLGQKRAAHYNHNDGDGMASVRVAQ
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALASAAAGLAPRGQRYVWQQYLDVESGEIAEGYHTPGRPNLVAMYSNNPSTVIDIGCAAG
HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC
STAALIKQRFPSSRVWGIEMNRAAAQVASSKIDRVLVGKFEDFDLEREGIAKGTLDGVLL
CHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHCCCCCCHHHHHH
ADVLEHMYNPWDVMVKLRPYMSPTGQLVLSIPNVRNLMLMDDLSKGKWTYAAAGLLDITH
HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEHHHHHHHHH
IRFFTLSEIVKFCNETGYRIVRAEHAIDGRLREFWNQNQSNTTPTEINMDRIKLKDVTRD
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCHH
ELLELCTIQFHLLLEKDPLHG
HHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA