| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hitA [H]
Identifier: 186477497
GI number: 186477497
Start: 3103098
End: 3103472
Strand: Reverse
Name: hitA [H]
Synonym: Bphy_2749
Alternate gene names: 186477497
Gene position: 3103472-3103098 (Counterclockwise)
Preceding gene: 186477498
Following gene: 186477496
Centisome position: 89.2
GC content: 58.93
Gene sequence:
>375_bases ATGAAGACCATGAGCCACCATCCGAACTGCCTTTTCTGCAAGATCGCCGCGGGAGAAATCCCCTCGACCAAAGTTCATGA AGACGACGAGTTCATTGCGTTCCGCGACATCCGTCCCGCAGCCGAAACGCATGTGCTCGTGATTCCGCGAAAACACATAG AAACGCTGTCCAATTGCACGGAAAGCGATTCCGTGCTGCTTGGTAAAATGTTGATATTGGTTGCACGTCTGGCCGATCAG CTTGGCGTCGCCTACACGGGCGGCCAGACGGGCTTCCGCACGGTCATCAATACGGGGCCTGGCGGCGGTCAGGAGGTCTA TCACCTGCACGCGCACCTGCTGGCGGGACCGCGGCCGTGGCTGAGGATGGGCTGA
Upstream 100 bases:
>100_bases ATCAAGGGCTGGCTGTATCTGTACGACAACAAGCCGCTGACGAATCCGCGCGGCTGGTTTTGACCCACGCCGCATCGGGC GCGCGCCGCGCTCGCCGTCC
Downstream 100 bases:
>100_bases ACGCGGTGGCGCAGTTTGCGGGACCGGCGTGTTGCCAGCGTAGGCACGCAACCAATCGACATAGATTCGCCGCATCGGCT TTTTGACTACGCACAATGGC
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKTMSHHPNCLFCKIAAGEIPSTKVHEDDEFIAFRDIRPAAETHVLVIPRKHIETLSNCTESDSVLLGKMLILVARLADQ LGVAYTGGQTGFRTVINTGPGGGQEVYHLHAHLLAGPRPWLRMG
Sequences:
>Translated_124_residues MKTMSHHPNCLFCKIAAGEIPSTKVHEDDEFIAFRDIRPAAETHVLVIPRKHIETLSNCTESDSVLLGKMLILVARLADQ LGVAYTGGQTGFRTVINTGPGGGQEVYHLHAHLLAGPRPWLRMG >Mature_124_residues MKTMSHHPNCLFCKIAAGEIPSTKVHEDDEFIAFRDIRPAAETHVLVIPRKHIETLSNCTESDSVLLGKMLILVARLADQ LGVAYTGGQTGFRTVINTGPGGGQEVYHLHAHLLAGPRPWLRMG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=108, Percent_Identity=44.4444444444444, Blast_Score=96, Evalue=8e-21, Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=39.2523364485981, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=45.045045045045, Blast_Score=88, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=44.4444444444444, Blast_Score=105, Evalue=5e-24, Organism=Drosophila melanogaster, GI28574010, Length=115, Percent_Identity=44.3478260869565, Blast_Score=98, Evalue=1e-21, Organism=Drosophila melanogaster, GI24581222, Length=115, Percent_Identity=44.3478260869565, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13581; Mature: 13581
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMSHHPNCLFCKIAAGEIPSTKVHEDDEFIAFRDIRPAAETHVLVIPRKHIETLSNCT CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECHHHHHHHHCCC ESDSVLLGKMLILVARLADQLGVAYTGGQTGFRTVINTGPGGGQEVYHLHAHLLAGPRPW CCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCHHHHHEEEHHHCCCCCC LRMG CCCC >Mature Secondary Structure MKTMSHHPNCLFCKIAAGEIPSTKVHEDDEFIAFRDIRPAAETHVLVIPRKHIETLSNCT CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECHHHHHHHHCCC ESDSVLLGKMLILVARLADQLGVAYTGGQTGFRTVINTGPGGGQEVYHLHAHLLAGPRPW CCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCHHHHHEEEHHHCCCCCC LRMG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA