| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is tatA
Identifier: 186477496
GI number: 186477496
Start: 3102549
End: 3102785
Strand: Reverse
Name: tatA
Synonym: Bphy_2748
Alternate gene names: 186477496
Gene position: 3102785-3102549 (Counterclockwise)
Preceding gene: 186477497
Following gene: 186477495
Centisome position: 89.18
GC content: 59.49
Gene sequence:
>237_bases ATGGGTTCGTTGAGTATTTGGCACTGGCTGATCGTTTTGCTGATCGTCGCTCTCGTGTTCGGCACGAAGAAGCTGCGCAA TATCGGCAGCGATCTGGGCGGCGCGGTGAAGGGCTTTAAGGAAGGCATGAAGGATGGCGAAACGCCCGAGGGACAGCAGC GCGACCAGCTGTCGCGCACGAACACCGTCGACGTCGACGCAAAGGAAAAGGCGCCGCATTCCGGCGATTCCCGCTAA
Upstream 100 bases:
>100_bases TATCGCAAATGGAGCGCCTCCGTCGATGCGCTTCGATTCACGCCGCAAGGCACACAGTTACCGTCGCTCAAGCACGACGG CGGGGGTTAAGGAGATTTTT
Downstream 100 bases:
>100_bases TCCGGCGCCAGCCGAGCCTGCGCTGACACGCGCGCACTGACGGGAAGCCCAATCCATGCTGGACCTCGGTTTGACCAAGA TGGCGTTGATCGGCGTGGTC
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MGSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRTNTVDVDAKEKAPHSGDSR
Sequences:
>Translated_78_residues MGSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRTNTVDVDAKEKAPHSGDSR >Mature_77_residues GSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRTNTVDVDAKEKAPHSGDSR
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=47, Percent_Identity=61.7021276595745, Blast_Score=65, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_BURP8 (B2JHX4)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858966.1 - GeneID: 6244231 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2748 - HOGENOM: HBG751935 - OMA: SVERNDA - ProtClustDB: PRK02958 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8492; Mature: 8361
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2041c1ec)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC NTVDVDAKEKAPHSGDSR CCCCCCCHHCCCCCCCCH >Mature Secondary Structure GSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC NTVDVDAKEKAPHSGDSR CCCCCCCHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA