Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477498

Identifier: 186477498

GI number: 186477498

Start: 3103510

End: 3103905

Strand: Reverse

Name: 186477498

Synonym: Bphy_2750

Alternate gene names: NA

Gene position: 3103905-3103510 (Counterclockwise)

Preceding gene: 186477499

Following gene: 186477497

Centisome position: 89.21

GC content: 57.83

Gene sequence:

>396_bases
ATGGAACAGTCGCATGGCGGGTACCCGCCACCGTCGTATCAGAGTTCAGTCGAGATCGACCGGCAACGCAGCCTGCGCAC
GCTGACGCACATCATTTACGCACTCTATGCCGTGTACTGGCTGACGGGCGGCATTTCGGTGCTGGTCGCGATCATTCTTA
ATTACATCAAGCGGCCAGAGACCGTCGGCACGCCTTATGAGCAGCATTTCGACTGGCAGATCCGCACGTTCTGGATGGGG
CTGATCGGTCATCTGATCGGCGTTGCGCTCTTTATCGTGCTGATCGGCGTGCCCATCTTGTGGGCTGTCGCGATCTGGAC
GCTGTACCGTATCATCAAGGGCTGGCTGTATCTGTACGACAACAAGCCGCTGACGAATCCGCGCGGCTGGTTTTGA

Upstream 100 bases:

>100_bases
AGGCTCGTTCGCGGGCGCGCGAACCGGCGGTCTTGAAAAGGCGGCTGTCGGCTCGACATTGCAATTGGCATCCATTCGCC
CCCTCGAGGAGGACGCAAGC

Downstream 100 bases:

>100_bases
CCCACGCCGCATCGGGCGCGCGCCGCGCTCGCCGTCCATGAAGACCATGAGCCACCATCCGAACTGCCTTTTCTGCAAGA
TCGCCGCGGGAGAAATCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: DNAJ Domain Protein; Chaperone Protein DNAJ

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MEQSHGGYPPPSYQSSVEIDRQRSLRTLTHIIYALYAVYWLTGGISVLVAIILNYIKRPETVGTPYEQHFDWQIRTFWMG
LIGHLIGVALFIVLIGVPILWAVAIWTLYRIIKGWLYLYDNKPLTNPRGWF

Sequences:

>Translated_131_residues
MEQSHGGYPPPSYQSSVEIDRQRSLRTLTHIIYALYAVYWLTGGISVLVAIILNYIKRPETVGTPYEQHFDWQIRTFWMG
LIGHLIGVALFIVLIGVPILWAVAIWTLYRIIKGWLYLYDNKPLTNPRGWF
>Mature_131_residues
MEQSHGGYPPPSYQSSVEIDRQRSLRTLTHIIYALYAVYWLTGGISVLVAIILNYIKRPETVGTPYEQHFDWQIRTFWMG
LIGHLIGVALFIVLIGVPILWAVAIWTLYRIIKGWLYLYDNKPLTNPRGWF

Specific function: Unknown

COG id: COG3671

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15238; Mature: 15238

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSHGGYPPPSYQSSVEIDRQRSLRTLTHIIYALYAVYWLTGGISVLVAIILNYIKRPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TVGTPYEQHFDWQIRTFWMGLIGHLIGVALFIVLIGVPILWAVAIWTLYRIIKGWLYLYD
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKPLTNPRGWF
CCCCCCCCCCC
>Mature Secondary Structure
MEQSHGGYPPPSYQSSVEIDRQRSLRTLTHIIYALYAVYWLTGGISVLVAIILNYIKRPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TVGTPYEQHFDWQIRTFWMGLIGHLIGVALFIVLIGVPILWAVAIWTLYRIIKGWLYLYD
CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKPLTNPRGWF
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA