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The map label for this gene is glcD [H]

Identifier: 186477261

GI number: 186477261

Start: 2830227

End: 2831684

Strand: Direct

Name: glcD [H]

Synonym: Bphy_2513

Alternate gene names: 186477261

Gene position: 2830227-2831684 (Clockwise)

Preceding gene: 186477259

Following gene: 186477262

Centisome position: 81.35

GC content: 63.65

Gene sequence:

>1458_bases
ATGGGCGTCAACCATCAGAACATTCGCCACCAGGAGACGCAGGTGAACCATCCCGTGCCGCCCATCCCCGTGCGCCGCCC
TTTTCCTGCTGAACTTCTTGCTGCGCTCAAGTCGGCATTCGGCGACCGCGTATCCACATCCGAAGCCGTCCGCGCCCATC
ATGGCCGCGACGAGTCGCCCTTCGATCCGCAGTTGCCTGACGCGGTCGTCTATGCACGCACCACCGAGGACGTGCAGACC
ATCGTCAAGCTATGCGGTCGATACGACGTGCCCATCATTCCGTACGGCAACGGCTCCTCGCTCGAAGGCCACCTGCTTGC
CGTGCAAGGCGGCGTGTCGATCGATCTTTCCGAAATGAACCGCGTGCTGTCCATCAACGCGGAAGATCTGACCGTCACCG
TCGAGCCCGGGATCTCCCGCAAGCAGCTGAACGAAGCGCTGCGCGACACGGGCCTGTTCTTCCCGATCGACCCCGGCGCG
GACGCGAGCATAGGTGGCATGTCGGCCACGCGCGCATCGGGCACGAACGCCGTGCGTTACGGCACGATGCGCGAAAACGT
CCTCGGCCTGTCCGTGGTGCTGGCCGATGGCCGCGTGATCCATACTGGCACGCGCGCACGCAAGTCGTCGGCCGGCTACG
ACCTCACGCGCCTCTTCGTCGGTTCTGAAGGCACGCTCGGTGTCATCACCGAAATCACCGTGCGCCTGTATCCGCAGCCG
GAAGCGGTGTCGGCAGCCGTGTGCACGTTCGCGTCGATGGGCGACGCCGTGCGCGCGGTGATCGAAACCATCCAGATCGG
CGTGCCCATCGCGCGCGTCGAGTTCGTCGATTCGCTCGCCGTCCGTTCGATCAACCGTCATTCGAACCTGACCTTGCGCG
AAGCGCCCACGCTGTTCTTCGAATTCCACGGCACGGAAGCCGGCGTGAAGGAACAGGCCGAACTCGTGCAGGAACTCGCT
GCGCAAAACAAGGGCGAAGGCTTCGAATGGGCGACGCGTCCGGAAGACCGCAGCCGTTTGTGGAACGCGCGTCATAGCGC
CTACTTCGCGATGCTGCAGCTGAAGCCCGGCAGCCGCGCCGTCACCACCGACGTCTGCGTGCCCATCTCGCGGCTCGCGG
AGTGCGTGGTCGAAACGGAAGAAGACCTGAAGACTTCGCCGCTGCCCTGTCCGATCGTCGGACACGTAGGTGATGGAAAT
TTCCACGTCGCGATGCTGATCGACCCGAACAAGCCCGAAGAACTGGAGGAAGCGGAGCGCCTGAATCATCGCATCGTGCA
GCGCGCGCTGCGCATGGACGGCACCTGCACGGGCGAGCATGGCGTAGGCCTGCACAAGATGGGGTTCCTGCTCGAAGAAC
ATGGTCCCGTCGCCGTCGACGTAATGCGCTCCATCAAGCATTCGCTCGATCCGCGCAACCTGATGAATCCAGGCAAGATC
TTTACGTGGGCAGCATAG

Upstream 100 bases:

>100_bases
ATGTCGTTCATGCTGTGATCCATTATAAGGAAGCCCTGCCTCGCGCTAGCGGCGGCCCGCCTGCAAGCGGGGCGCCGCGC
CGGCCGTCGATGGGCGTAAA

Downstream 100 bases:

>100_bases
CGTAACCGTATGTCCGGCCGCGCTGCGCAACGACGCGTGCGGTCGTCCAACGAGGAGACATTCCATGAACGCACCCGGCG
AGCTGTCCCCAGAGCTGTCG

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MGVNHQNIRHQETQVNHPVPPIPVRRPFPAELLAALKSAFGDRVSTSEAVRAHHGRDESPFDPQLPDAVVYARTTEDVQT
IVKLCGRYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMNRVLSINAEDLTVTVEPGISRKQLNEALRDTGLFFPIDPGA
DASIGGMSATRASGTNAVRYGTMRENVLGLSVVLADGRVIHTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQP
EAVSAAVCTFASMGDAVRAVIETIQIGVPIARVEFVDSLAVRSINRHSNLTLREAPTLFFEFHGTEAGVKEQAELVQELA
AQNKGEGFEWATRPEDRSRLWNARHSAYFAMLQLKPGSRAVTTDVCVPISRLAECVVETEEDLKTSPLPCPIVGHVGDGN
FHVAMLIDPNKPEELEEAERLNHRIVQRALRMDGTCTGEHGVGLHKMGFLLEEHGPVAVDVMRSIKHSLDPRNLMNPGKI
FTWAA

Sequences:

>Translated_485_residues
MGVNHQNIRHQETQVNHPVPPIPVRRPFPAELLAALKSAFGDRVSTSEAVRAHHGRDESPFDPQLPDAVVYARTTEDVQT
IVKLCGRYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMNRVLSINAEDLTVTVEPGISRKQLNEALRDTGLFFPIDPGA
DASIGGMSATRASGTNAVRYGTMRENVLGLSVVLADGRVIHTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQP
EAVSAAVCTFASMGDAVRAVIETIQIGVPIARVEFVDSLAVRSINRHSNLTLREAPTLFFEFHGTEAGVKEQAELVQELA
AQNKGEGFEWATRPEDRSRLWNARHSAYFAMLQLKPGSRAVTTDVCVPISRLAECVVETEEDLKTSPLPCPIVGHVGDGN
FHVAMLIDPNKPEELEEAERLNHRIVQRALRMDGTCTGEHGVGLHKMGFLLEEHGPVAVDVMRSIKHSLDPRNLMNPGKI
FTWAA
>Mature_484_residues
GVNHQNIRHQETQVNHPVPPIPVRRPFPAELLAALKSAFGDRVSTSEAVRAHHGRDESPFDPQLPDAVVYARTTEDVQTI
VKLCGRYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMNRVLSINAEDLTVTVEPGISRKQLNEALRDTGLFFPIDPGAD
ASIGGMSATRASGTNAVRYGTMRENVLGLSVVLADGRVIHTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQPE
AVSAAVCTFASMGDAVRAVIETIQIGVPIARVEFVDSLAVRSINRHSNLTLREAPTLFFEFHGTEAGVKEQAELVQELAA
QNKGEGFEWATRPEDRSRLWNARHSAYFAMLQLKPGSRAVTTDVCVPISRLAECVVETEEDLKTSPLPCPIVGHVGDGNF
HVAMLIDPNKPEELEEAERLNHRIVQRALRMDGTCTGEHGVGLHKMGFLLEEHGPVAVDVMRSIKHSLDPRNLMNPGKIF
TWAA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=455, Percent_Identity=53.6263736263736, Blast_Score=500, Evalue=1e-141,
Organism=Homo sapiens, GI37595754, Length=478, Percent_Identity=51.0460251046025, Blast_Score=491, Evalue=1e-139,
Organism=Homo sapiens, GI119964728, Length=419, Percent_Identity=29.8329355608592, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4501993, Length=465, Percent_Identity=25.8064516129032, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI1789351, Length=426, Percent_Identity=30.2816901408451, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1787977, Length=525, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI48994907, Length=487, Percent_Identity=25.8726899383984, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI48994914, Length=217, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71992373, Length=442, Percent_Identity=47.0588235294118, Blast_Score=429, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI71992381, Length=442, Percent_Identity=45.9276018099548, Blast_Score=410, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI71992392, Length=380, Percent_Identity=48.1578947368421, Blast_Score=384, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17534361, Length=424, Percent_Identity=26.8867924528302, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17556096, Length=454, Percent_Identity=24.0088105726872, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320027, Length=454, Percent_Identity=40.7488986784141, Blast_Score=337, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6320023, Length=510, Percent_Identity=25.2941176470588, Blast_Score=154, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6320764, Length=443, Percent_Identity=27.313769751693, Blast_Score=150, Evalue=5e-37,
Organism=Drosophila melanogaster, GI18921117, Length=422, Percent_Identity=26.5402843601896, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24639277, Length=422, Percent_Identity=26.5402843601896, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24639275, Length=422, Percent_Identity=26.5402843601896, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24653753, Length=464, Percent_Identity=26.0775862068966, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 52813; Mature: 52681

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVNHQNIRHQETQVNHPVPPIPVRRPFPAELLAALKSAFGDRVSTSEAVRAHHGRDESP
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
FDPQLPDAVVYARTTEDVQTIVKLCGRYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMN
CCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCEEEHHHCC
RVLSINAEDLTVTVEPGISRKQLNEALRDTGLFFPIDPGADASIGGMSATRASGTNAVRY
CEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
GTMRENVLGLSVVLADGRVIHTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQP
CCHHHCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC
EAVSAAVCTFASMGDAVRAVIETIQIGVPIARVEFVDSLAVRSINRHSNLTLREAPTLFF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
EFHGTEAGVKEQAELVQELAAQNKGEGFEWATRPEDRSRLWNARHSAYFAMLQLKPGSRA
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCE
VTTDVCVPISRLAECVVETEEDLKTSPLPCPIVGHVGDGNFHVAMLIDPNKPEELEEAER
EEHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHH
LNHRIVQRALRMDGTCTGEHGVGLHKMGFLLEEHGPVAVDVMRSIKHSLDPRNLMNPGKI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCE
FTWAA
EEECC
>Mature Secondary Structure 
GVNHQNIRHQETQVNHPVPPIPVRRPFPAELLAALKSAFGDRVSTSEAVRAHHGRDESP
CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
FDPQLPDAVVYARTTEDVQTIVKLCGRYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMN
CCCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCEEEHHHCC
RVLSINAEDLTVTVEPGISRKQLNEALRDTGLFFPIDPGADASIGGMSATRASGTNAVRY
CEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
GTMRENVLGLSVVLADGRVIHTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQP
CCHHHCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC
EAVSAAVCTFASMGDAVRAVIETIQIGVPIARVEFVDSLAVRSINRHSNLTLREAPTLFF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
EFHGTEAGVKEQAELVQELAAQNKGEGFEWATRPEDRSRLWNARHSAYFAMLQLKPGSRA
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCE
VTTDVCVPISRLAECVVETEEDLKTSPLPCPIVGHVGDGNFHVAMLIDPNKPEELEEAER
EEHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHH
LNHRIVQRALRMDGTCTGEHGVGLHKMGFLLEEHGPVAVDVMRSIKHSLDPRNLMNPGKI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCE
FTWAA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]