| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 186477259
GI number: 186477259
Start: 2828166
End: 2829239
Strand: Direct
Name: aroG [H]
Synonym: Bphy_2510
Alternate gene names: 186477259
Gene position: 2828166-2829239 (Clockwise)
Preceding gene: 186477258
Following gene: 186477261
Centisome position: 81.29
GC content: 63.87
Gene sequence:
>1074_bases ATGCCCCCGCACAACACCGACGATGTCCGTATCCGCGAATTGAAAGAACTGACGCCGCCCGCGCACCTGATCCGCGAATT TCCCTGCGACGAAAAAGTGTCGGACCTGATCTTCAACGCGCGTCAATCGATGCATCGGATTCTGCACGGCATGGACGACC GGCTGATCGTGATCGTCGGGCCGTGCTCGATTCACGACACGAAGGCCGCGCTCGAGTACGCGGGGCGCCTGATCGAGCAA CGCAAGCGCTTCGCGGGCGAACTGGAAATCGTGATGCGCGTGTACTTCGAAAAACCGCGCACGACGGTGGGCTGGAAAGG CCTCATCAACGACCCGTACATGGACAACAGCTTCAAGATCAACGACGGCCTGCGCACCGCCCGCGAGCTGCTGATGAAGA TCAACGAGCTGGGGCTGCCCGCCGGCACCGAGTATCTCGACATGATCAGCCCGCAATACATCGCCGATCTGATCTCGTGG GGCGCGATCGGCGCGCGCACGACGGAATCGCAGGTGCATCGCGAACTCGCGTCGGGGCTGTCGTGCCCGGTCGGCTTCAA GAACGGCACGGACGGCAACGTGAAGATCGCCGTCGACGCGATCAAGGCCGCTTCGCAGCCTCACCATTTCCTGTCAGTGA CGAAGGGCGGCCATTCGGCCATTGTCTCGACGGCGGGCAACGAGGATTGCCACATCATCCTGCGCGGCGGGAAGGCCCCG AACTACGACGCCGACAGCGTGAACGCCGCGTGCAGCGACATCGGCAAGGCAGGCCTCGCCGCGCGTCTGATGATCGACGC GAGCCACGCGAACAGCTCGAAGAAGCATGAAAACCAGATTCCCGTGTGCGCGGACATCGGCCGCCAGATCGCGGCGGGCG ACGAGCGCATCGTCGGCGTGATGGTTGAATCGCATCTCGTCGCGGGCCGTCAGGATCTGGTGGACGGCTGCGCGCTGACG TACGGTCAGAGCATCACCGATGCGTGCATCGGCTGGGACGACAGCGTTGCCGTGCTCGAAGGTCTTGCAGACGCCGTCAA GCAGCGGCGCGTCGCGCGCGGCAGCGGAAACTGA
Upstream 100 bases:
>100_bases TTTGACGTTGACCTTTTTAGCCTGTTGATCTGTTCGCCGCGGCGCCGTCGTTGAATCGCAGCAGACCGCCCGAACCGCGC AAAGAAACGAGGAGAAAACC
Downstream 100 bases:
>100_bases TACCGTTTCATCGTCTTTCTACGCAGACTTCGCCCGGCTCACGCAGCCGGGCTTTTTTTGGCCATCCGGCCGGATCGAAC TGTCCTCTTGAAGCAGTCCG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPPHNTDDVRIRELKELTPPAHLIREFPCDEKVSDLIFNARQSMHRILHGMDDRLIVIVGPCSIHDTKAALEYAGRLIEQ RKRFAGELEIVMRVYFEKPRTTVGWKGLINDPYMDNSFKINDGLRTARELLMKINELGLPAGTEYLDMISPQYIADLISW GAIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAP NYDADSVNAACSDIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVAGRQDLVDGCALT YGQSITDACIGWDDSVAVLEGLADAVKQRRVARGSGN
Sequences:
>Translated_357_residues MPPHNTDDVRIRELKELTPPAHLIREFPCDEKVSDLIFNARQSMHRILHGMDDRLIVIVGPCSIHDTKAALEYAGRLIEQ RKRFAGELEIVMRVYFEKPRTTVGWKGLINDPYMDNSFKINDGLRTARELLMKINELGLPAGTEYLDMISPQYIADLISW GAIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAP NYDADSVNAACSDIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVAGRQDLVDGCALT YGQSITDACIGWDDSVAVLEGLADAVKQRRVARGSGN >Mature_356_residues PPHNTDDVRIRELKELTPPAHLIREFPCDEKVSDLIFNARQSMHRILHGMDDRLIVIVGPCSIHDTKAALEYAGRLIEQR KRFAGELEIVMRVYFEKPRTTVGWKGLINDPYMDNSFKINDGLRTARELLMKINELGLPAGTEYLDMISPQYIADLISWG AIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAPN YDADSVNAACSDIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGVMVESHLVAGRQDLVDGCALTY GQSITDACIGWDDSVAVLEGLADAVKQRRVARGSGN
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=347, Percent_Identity=66.5706051873199, Blast_Score=486, Evalue=1e-139, Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=54.3352601156069, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI1788953, Length=348, Percent_Identity=47.9885057471264, Blast_Score=335, Evalue=3e-93, Organism=Saccharomyces cerevisiae, GI6320240, Length=354, Percent_Identity=53.1073446327684, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319726, Length=359, Percent_Identity=54.5961002785515, Blast_Score=356, Evalue=3e-99,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38725; Mature: 38593
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHNTDDVRIRELKELTPPAHLIREFPCDEKVSDLIFNARQSMHRILHGMDDRLIVIVG CCCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC PCSIHDTKAALEYAGRLIEQRKRFAGELEIVMRVYFEKPRTTVGWKGLINDPYMDNSFKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE NDGLRTARELLMKINELGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHRELASGL CHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC SCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAP CCCCCCCCCCCCCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCC NYDADSVNAACSDIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGV CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCCHHHHHCHHHHCCCCCEEEH MVESHLVAGRQDLVDGCALTYGQSITDACIGWDDSVAVLEGLADAVKQRRVARGSGN HHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PPHNTDDVRIRELKELTPPAHLIREFPCDEKVSDLIFNARQSMHRILHGMDDRLIVIVG CCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC PCSIHDTKAALEYAGRLIEQRKRFAGELEIVMRVYFEKPRTTVGWKGLINDPYMDNSFKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE NDGLRTARELLMKINELGLPAGTEYLDMISPQYIADLISWGAIGARTTESQVHRELASGL CHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC SCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKAP CCCCCCCCCCCCCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCC NYDADSVNAACSDIGKAGLAARLMIDASHANSSKKHENQIPVCADIGRQIAAGDERIVGV CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCCCHHHHHCHHHHCCCCCEEEH MVESHLVAGRQDLVDGCALTYGQSITDACIGWDDSVAVLEGLADAVKQRRVARGSGN HHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]