| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477169
Identifier: 186477169
GI number: 186477169
Start: 2719357
End: 2720001
Strand: Direct
Name: 186477169
Synonym: Bphy_2418
Alternate gene names: NA
Gene position: 2719357-2720001 (Clockwise)
Preceding gene: 186477168
Following gene: 186477170
Centisome position: 78.16
GC content: 61.71
Gene sequence:
>645_bases ATGACCGATGGCATCGACGCCACGCAGCCACTGTGGTTTTACGACTTTGTCTCACCGTTTTCGTATCTGCTGCTCGAACA GCACGATAAATGGCCTGAACTGCCGTTCGCGCTGACGCCCGTGCTGCTGAACGACCTGTATCGCCACTGGCGTCAGCGGA TCGCCTACGACGTGCCCGCGAAACGCATTTTCACGTACCGGTATGCGCTGTTTCGCGCGGAACAGCTCGGCATTCCGTTC CGCATGCCGCCCGCGCACCCGTTCGATTCGTTGAAGCCGATGCTGCTGTCGGTCGCGCTAGGCTCGGATCTGCACACGGT GCGCGAGATCTTCCGCTTTATCTGGCGCGACGGGCGCGATCCGTCGAGCGACGAAGGCTTCGCCGCGCTGTGCGAACGCC TGAAGGTAGCGGATGGTCAGGCGCTGATCGAACGGGAAGCAACGCGCGCGCAACTGATGCGCAACAGCACCGACGCGATC GCAATCGGCGTATTCGGCGTACCGACGTTCTGGCTGAACAAACAGTTGTTCTGGGGCGAAGACGCGCTGCCGATGGTGCT CTACTGCGCACGCACGCCGAACTGGCTCGAATCGAAAGAAGTGAAGCGGATCACGTCGCTGCCTTCGGGGTTGCCGGGCG CTTGA
Upstream 100 bases:
>100_bases GATGCGCACGGGGCTTGCTCCGCGTAAGATCGAAACAATCAGAATCGGCTGACGCGCGGCATCGCCGACAGCCCGCCGAT TCAGGCAACCGGGAGACATC
Downstream 100 bases:
>100_bases GCTGATCGCGCTGCGAGCGACACACGTCGCACGCCAGCGGCGAACGCCGGAGCGACACGTGATGCCCGGCATAGGGCATG CACTATGCCCGCGCGGGGCA
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase; Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTDGIDATQPLWFYDFVSPFSYLLLEQHDKWPELPFALTPVLLNDLYRHWRQRIAYDVPAKRIFTYRYALFRAEQLGIPF RMPPAHPFDSLKPMLLSVALGSDLHTVREIFRFIWRDGRDPSSDEGFAALCERLKVADGQALIEREATRAQLMRNSTDAI AIGVFGVPTFWLNKQLFWGEDALPMVLYCARTPNWLESKEVKRITSLPSGLPGA
Sequences:
>Translated_214_residues MTDGIDATQPLWFYDFVSPFSYLLLEQHDKWPELPFALTPVLLNDLYRHWRQRIAYDVPAKRIFTYRYALFRAEQLGIPF RMPPAHPFDSLKPMLLSVALGSDLHTVREIFRFIWRDGRDPSSDEGFAALCERLKVADGQALIEREATRAQLMRNSTDAI AIGVFGVPTFWLNKQLFWGEDALPMVLYCARTPNWLESKEVKRITSLPSGLPGA >Mature_213_residues TDGIDATQPLWFYDFVSPFSYLLLEQHDKWPELPFALTPVLLNDLYRHWRQRIAYDVPAKRIFTYRYALFRAEQLGIPFR MPPAHPFDSLKPMLLSVALGSDLHTVREIFRFIWRDGRDPSSDEGFAALCERLKVADGQALIEREATRAQLMRNSTDAIA IGVFGVPTFWLNKQLFWGEDALPMVLYCARTPNWLESKEVKRITSLPSGLPGA
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24649; Mature: 24517
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGIDATQPLWFYDFVSPFSYLLLEQHDKWPELPFALTPVLLNDLYRHWRQRIAYDVPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH KRIFTYRYALFRAEQLGIPFRMPPAHPFDSLKPMLLSVALGSDLHTVREIFRFIWRDGRD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PSSDEGFAALCERLKVADGQALIEREATRAQLMRNSTDAIAIGVFGVPTFWLNKQLFWGE CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCEEECCC DALPMVLYCARTPNWLESKEVKRITSLPSGLPGA CCCCHHHEECCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDGIDATQPLWFYDFVSPFSYLLLEQHDKWPELPFALTPVLLNDLYRHWRQRIAYDVPA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH KRIFTYRYALFRAEQLGIPFRMPPAHPFDSLKPMLLSVALGSDLHTVREIFRFIWRDGRD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PSSDEGFAALCERLKVADGQALIEREATRAQLMRNSTDAIAIGVFGVPTFWLNKQLFWGE CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCEEECCC DALPMVLYCARTPNWLESKEVKRITSLPSGLPGA CCCCHHHEECCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA